------------------------------------------------------------ clusterID = 1 # of genes = 1 -------------------------- [1] U21090 U21090 Hsa.41283 gene 1 "Human DNA polymerase delta small subunit mRNA, complete cds. " ------------------------------------------------------------ clusterID = 2 # of genes = 54 -------------------------- [1] T59954 T59954 Hsa.1119 3' UTR 1 79441 THYMOSIN BETA-4 (HUMAN);. [2] T51574 T51574 Hsa.1836 3' UTR 1 72258 40S RIBOSOMAL PROTEIN S24 (HUMAN). [3] H24754 H24754 Hsa.1238 3' UTR 1 160886 FRUCTOSE-BISPHOSPHATE ALDOLASE A (HUMAN);. [4] M11354 M11354 Hsa.1500 gene 1 "Human H3.3 histone, class B mRNA, complete cds. " [5] T89730 T89730 Hsa.10363 3' UTR 2a 117433 TUBULIN BETA-1 CHAIN (Gallus gallus) [6] H46728 H46728 Hsa.10975 3' UTR 2a 177924 HYPOTHETICAL HIT-LIKE PROTEIN HI0961 (Haemophilus influenzae) [7] T54650 T54650 Hsa.10510 3' UTR 2a 73757 "HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, F ALPHA CHAIN PRECURSOR (Homo sapiens) " [8] D14662 D14662 Hsa.120 gene 1 "Human mRNA for ORF, complete cds. " [9] T57686 T57686 Hsa.1137 3' UTR 1 79398 TUBULIN ALPHA-1 CHAIN (HUMAN). [10] T63133 T63133 Hsa.1116 3' UTR 1 79272 THYMOSIN BETA-10 (HUMAN);. [11] M27539 M27539 Hsa.1822 gene 1 "Human MHC class I HLA-A cell surface antigen mRNA, (HLA-A28,-B40, -Cw3), clone LB45. " [12] L09159(1) L09159 Hsa.1181 gene 1 "Homo sapiens RHOA proto-oncogene multi-drug-resistance protein mRNA, 3' end. " [13] T74556 T74556 Hsa.1190 3' UTR 1 84680 "ATP SYNTHASE ALPHA CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN);. " [14] T63591 T63591 Hsa.1006 3' UTR 1 79994 60S ACIDIC RIBOSOMAL PROTEIN P0 (HUMAN);. [15] H48027 H48027 Hsa.100 3' UTR 1 193650 ATP SYNTHASE LIPID-BINDING PROTEIN P1 PRECURSOR (HUMAN);. [16] M84739 M84739 Hsa.1050 gene 1 "Human autoantigen calreticulin mRNA, complete cds. " [17] X61971 X61971 Hsa.1178 gene 1 H.sapiens mRNA for macropain subunit delta. [18] D14696 D14696 Hsa.122 gene 1 Human mRNA (KIAA0026) for ORF (complete cds) and HepG2 mRNA identical sequence. [19] M65028 M65028 Hsa.1044 gene 1 "Human hnRNP type A/B protein mRNA, complete cds. " [20] H46732 H46732 Hsa.1738 3' UTR 1 177923 14 KD PROTEIN OF SIGNAL RECOGNITION PARTICLE (HUMAN);contains PTR5 repetitive element ;. [21] M93010 M93010 Hsa.1804 gene 1 "Human epithelial cell marker protein 1 (HMe1) mRNA, complete cds. " [22] T87527 T87527 Hsa.17649 3' UTR 2a 115413 HEAT SHOCK PROTEIN HSP 84 (Mus musculus) [23] T52642 T52642 Hsa.10176 3' UTR 2a 67177 GUANYLATE KINASE HOMOLOG (Vaccinia virus) [24] H69869 H69869 Hsa.1277 3' UTR 1 212381 CLATHRIN LIGHT CHAIN A (HUMAN);. [25] R73052 R73052 Hsa.1687 3' UTR 1 156448 "Homo sapiens growth-arrest-specific protein (gas) mRNA, complete cds. " [26] R80966 R80966 Hsa.1278 3' UTR 1 147324 CLATHRIN LIGHT CHAIN B (HUMAN);. [27] R44884 R44884 Hsa.1121 3' UTR 1 33865 "ADP,ATP CARRIER PROTEIN, LIVER ISOFORM T2 (HUMAN);. " [28] R70016 R70016 Hsa.1558 3' UTR 1 142466 "Human F-actin capping protein beta subunit mRNA, complete cds. " [29] M21339 M21339 Hsa.1504 gene 1 "Human non-histone chromosomal protein HMG-14 gene, complete cds. " [30] T52343 T52343 Hsa.1473 3' UTR 1 72030 GLUTATHIONE PEROXIDASE (HUMAN). [31] L09159(2) L09159 Hsa.1181 gene 1 "Homo sapiens RHOA proto-oncogene multi-drug-resistance protein mRNA, 3' end. " [32] J03544 J03544 Hsa.1821 gene 1 "Human brain glycogen phosphorylase mRNA, complete cds. " [33] K03001 K03001 Hsa.1239 gene 1 Human aldehyde dehydrogenase 2 mRNA. [34] J04173 J04173 Hsa.1896 gene 1 "PHOSPHOGLYCERATE MUTASE, BRAIN FORM (HUMAN);. " [35] M23114 M23114 Hsa.1542 gene 1 "Homo sapiens calcium-ATPase (HK1) mRNA, complete cds. " [36] X55362 X55362 Hsa.1867 gene 1 Human odc1 mRNA for ornithine decarboxylase. [37] D00265 D00265 Hsa.17 gene 1 "Human cytochrome c mRNA, carboxyl-terminal region and 3' non-coding region. " [38] T49732 T49732 Hsa.1591 3' UTR 1 67988 "Human SnRNP core protein Sm D2 mRNA, complete cds. " [39] T51571 T51571 Hsa.1207 3' UTR 1 72250 P24480 CALGIZZARIN. [40] T53412 T53412 Hsa.1773 3' UTR 1 68806 "KERATIN, TYPE I CYTOSKELETAL 18 (HUMAN). " [41] R52000 R52000 Hsa.1739 3' UTR 1 39861 PLACENTAL RIBONUCLEASE INHIBITOR (HUMAN);. [42] U02493(1) U02493 Hsa.168 gene 1 "Human 54 kDa protein mRNA, complete cds. " [43] T54276 T54276 Hsa.1567 3' UTR 1 69195 PROTEASOME COMPONENT C13 (HUMAN). [44] L00352 L00352 Hsa.17353 gene 1 "Human low density lipoprotein receptor gene, exon 18. " [45] R88740 R88740 Hsa.1272 3' UTR 1 194984 "ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL PRECURSOR (HUMAN);. " [46] R23889 R23889 Hsa.18401 3' UTR 2a 131036 TRANSFERRIN RECEPTOR PROTEIN (Homo sapiens) [47] U07132 U07132 Hsa.1694 gene 1 "Human steroid hormone receptor Ner-I mRNA, complete cds. " [48] H49652 H49652 Hsa.12893 3' UTR 2a 274422 "P01096 ATPASE INHIBITOR, MITOCHONDRIAL ;. " [49] R80703 R80703 Hsa.14885 3' UTR 2a 146807 TUMOR-ASSOCIATED ANTIGEN CO-029 (Homo sapiens) [50] D14658 D14658 Hsa.116 gene 1 "Human mRNA for ORF, complete cds. " [51] J04046 J04046 Hsa.1309 gene 1 "Human calmodulin mRNA, complete cds. " [52] T60855 T60855 Hsa.11628 3' UTR 2a 76721 CALCINEURIN B SUBUNIT ISOFORM 1 (Homo sapiens) [53] H04282 H04282 Hsa.16501 3' UTR 2a 152143 "DOPAMINE- AND CAMP-REGULATED NEURONAL PHOSPHOPROTEIN, DARPP-32 (Bos taurus) " [54] M84349 M84349 Hsa.1325 gene 1 "Human transmembrane protein (CD59) gene, exon 4. " ------------------------------------------------------------ clusterID = 3 # of genes = 5 -------------------------- [1] X77956 X77956 Hsa.2806 gene 1 H.sapiens Id1 mRNA. [2] X87342 X87342 Hsa.3180 gene 1 H.sapiens mRNA for human giant larvae homolog. [3] X51416 X51416 Hsa.3040 gene 1 Human mRNA for steroid hormone receptor hERR1. [4] L32977 L32977 Hsa.3813 gene 1 "Homo sapiens (clone f17252) ubiquinol cytochrome c reductase Rieske iron-sulphur protein (UQCRFS1) gene, exon 2. " [5] U27337 U27337 Hsa.36678 gene 1 "Human alpha (1,3) fucosyltransferase (FUT6) mRNA, minor transcript III, complete cds. " ------------------------------------------------------------ clusterID = 4 # of genes = 6 -------------------------- [1] R71401 R71401 Hsa.25142 3' UTR 2a 155096 "HEMOGLOBIN ALPHA-1, ALPHA-2, AND ALPHA-3 CHAINS (Macaca assamenses) " [2] X01410 X01410 Hsa.2035 gene 1 H.sapiens mRNA fragment for T-cell receptor beta chain D-J-C (JUR-beta 2). [3] H42884 H42884 Hsa.36897 3' UTR 2a 183086 INTERFERON REGULATORY FACTOR 1 (Homo sapiens) [4] M59819 M59819 Hsa.2209 gene 1 "Human granulocyte colony-stimulating factor receptor (G-CSFR-2) mRNA, complete cds. " [5] X02228 X02228 Hsa.818 gene 1 Human HLA-DP-beta 1 gene and HLA-DP-alpha-1 gene exon 1. [6] R53455 R53455 Hsa.3921 3' UTR 2a 39833 SERINE CARBOXYPEPTIDASE I PRECURSOR (Hordeum vulgare) ------------------------------------------------------------ clusterID = 5 # of genes = 10 -------------------------- [1] M19045 M19045 Hsa.891 gene 1 "Human lysozyme mRNA, complete cds. " [2] R81330 R81330 Hsa.8133 3' UTR 2a 147723 MYRISTOYLATED ALANINE-RICH C-KINASE SUBSTRATE (Homo sapiens) [3] T65740 T65740 Hsa.5756 3' UTR 2a 80348 SINGLE-STRANDED DNA BINDING PROTEIN P9 PRECURSOR (Mus musculus) [4] H63354 H63354 Hsa.42442 3' UTR 2a 209278 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [5] M37721 M37721 Hsa.974 gene 1 PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE PRECURSOR (HUMAN);contains Alu repetitive element;. [6] H11374 H11374 Hsa.4153 3' UTR 2a 47526 14-3-3-LIKE PROTEIN (Xenopus laevis) [7] X80507 X80507 Hsa.9574 gene 1 H.sapiens YAP65 mRNA. [8] H65425 H65425 Hsa.4286 3' UTR 2a 238508 FIBRONECTIN RECEPTOR BETA SUBUNIT PRECURSOR (Homo sapiens) [9] R67999 R67999 Hsa.5908 3' UTR 2a 138262 PROBABLE ATP-DEPENDENT RNA HELICASE PRH1 (Schizosaccharomyces pombe) [10] D00760 D00760 Hsa.58 gene 1 PROTEASOME COMPONENT C3 (HUMAN);. ------------------------------------------------------------ clusterID = 6 # of genes = 7 -------------------------- [1] H58397 H58397 Hsa.449 3' UTR 1 205866 "TRANS-1,2-DIHYDROBENZENE-1,2-DIOL DEHYDROGENASE (HUMAN);. " [2] H77597 H77597 Hsa.2715 3' UTR 1 214162 H.sapiens mRNA for metallothionein (HUMAN);. [3] D15049 D15049 Hsa.329 gene 1 Human mRNA for protein tyrosine phosphatase. [4] M22538 M22538 Hsa.928 gene 1 NADH-UBIQUINONE DEHYDROGENASE 24 KD SUBUNIT PRECURSOR (HUMAN);. [5] T51539 T51539 Hsa.9994 3' UTR 2a 72395 HEPATOCYTE GROWTH FACTOR-LIKE PROTEIN PRECURSOR (Homo sapiens) --68dd_5699-4733_4d62-1290_1927 Content-Type: application/octet-stream Content-Transfer-Encoding: 7bit Content-MD5: NAlwVJQ4msWkg7LKaY/Asw== Content-Description: rank2b.info [6] M36634 M36634 Hsa.2097 gene 1 "Human vasoactive intestinal peptide (VIP) mRNA, complete cds. " [7] M84490 M84490 Hsa.865 gene 1 "Human extracellular signal-regulated kinase 1 mRNA, 3' end. " ------------------------------------------------------------ clusterID = 7 # of genes = 28 -------------------------- [1] X02152 X02152 Hsa.2846 gene 1 "Human mRNA for lactate dehydrogenase-A (LDH-A, EC 1.1.1.27). " [2] T69748 T69748 Hsa.2933 3' UTR 1 108186 PHOSPHOGLYCERATE KINASE 1 (HUMAN);. [3] R43913 R43913 Hsa.3157 3' UTR 1 32966 P37879 LYSYL-TRNA SYNTHETASE ;. [4] X12671 X12671 Hsa.3306 gene 1 Human gene for heterogeneous nuclear ribonucleoprotein (hnRNP) core protein A1. [5] X51345 X51345 Hsa.2830 gene 1 Human jun-B mRNA for JUN-B protein. [6] X70944 X70944 Hsa.2966 gene 1 H.sapiens mRNA for PTB-associated splicing factor. [7] X05276 X05276 Hsa.3067 gene 1 Human mRNA for fibroblast tropomyosin TM30 (pl). [8] X70326 X70326 Hsa.2863 gene 1 H.sapiens MacMarcks mRNA. [9] H87240 H87240 Hsa.287 3' UTR 1 220392 P29595 UBIQUITIN-LIKE PROTEIN NEDD-8 ;. [10] U29607 U29607 Hsa.3278 gene 1 "Human methionine aminopeptidase mRNA, complete cds. " [11] D50063 D50063 Hsa.36683 gene 1 Human mRNA for proteasome subunit p40 (Mov34). [12] T86473 T86473 Hsa.3331 3' UTR 1 114645 NUCLEOSIDE DIPHOSPHATE KINASE A (HUMAN);. [13] X82103 X82103 Hsa.3115 gene 1 H.sapiens mRNA for beta-COP. [14] Z47087 Z47087 Hsa.3198 gene 1 H.sapiens mRNA for RNA polymerase II elongation factor-like protein. [15] R98842 R98842 Hsa.40063 3' UTR 2a 207029 PROTHYMOSIN ALPHA (Homo sapiens) [16] T56690 T56690 Hsa.3648 3' UTR 2a 69419 CHLORINE CHANNEL PROTEIN P64 (Bos taurus) [17] T92259 T92259 Hsa.2962 3' UTR 1 118111 PROTEASOME IOTA CHAIN (HUMAN);. [18] X69910 X69910 Hsa.2922 gene 1 H.sapiens p63 mRNA for transmembrane protein. [19] U29175 U29175 Hsa.399 gene 1 "Human estrogen receptor (BRG1) mRNA, complete cds. " [20] X68194 X68194 Hsa.2793 gene 1 H.sapiens h-Sp1 mRNA. [21] T84082 T84082 Hsa.2832 3' UTR 1 111253 ER LUMEN PROTEIN RETAINING RECEPTOR 1 (HUMAN);. [22] D10522(1) D10522 Hsa.32 gene 1 "Human mRNA for 80K-L protein, complete cds. (HUMAN);contains element TAR1 repetitive element ;. " [23] D10522(2) D10522 Hsa.32 gene 1 "Human mRNA for 80K-L protein, complete cds. (HUMAN);contains element TAR1 repetitive element ;. " [24] L41559 L41559 Hsa.3252 gene 1 "Homo sapiens pterin-4a-carbinolamine dehydratase (PCBD) mRNA, complete cds. " [25] X74262 X74262 Hsa.2808 gene 1 H.sapiens RbAp48 mRNA encoding retinoblastoma binding protein. [26] Y00971 Y00971 Hsa.2964 gene 1 Human mRNA for phosphoriobosyl pyrophosphate synthetase subunit II (EC 2.7.6.1). [27] U20998 U20998 Hsa.3316 gene 1 "Homo sapiens signal recognition particle subunit 9 (SRP9) mRNA, complete cds. " [28] U20972 U20972 Hsa.3315 gene 1 "Human 14-3-3 protein epsilon isoform mRNA, complete cds. " ------------------------------------------------------------ clusterID = 8 # of genes = 4 -------------------------- [1] M86934 M86934 Hsa.1701 gene 1 "Human GS1 (protein of unknown function) mRNA, complete cds. " [2] M28373 M28373 Hsa.1731 gene 1 "Homo sapiens amyloid protein A4 precursor mRNA, 3' end of cds. " [3] T52806 T52806 Hsa.10212 3' UTR 2a 67927 ANTIGEN KI-67 (Homo sapiens) [4] T41204 T41204 Hsa.1209 3' UTR 1 62344 "P14780 92 KD TYPE V COLLAGENASE PRECURSOR ,. " ------------------------------------------------------------ clusterID = 9 # of genes = 4 -------------------------- [1] U10324 U10324 Hsa.491 gene 1 "Human nuclear factor NF90 mRNA, complete cds. " [2] R49416 R49416 Hsa.2280 3' UTR 1 37082 CATHEPSIN H PRECURSOR (HUMAN);. [3] H16991 H16991 Hsa.960 3' UTR 1 50234 NUCLEOLYSIN TIAR (HUMAN);. [4] L25851 L25851 Hsa.855 gene 1 INTEGRIN ALPHA-E PRECURSOR (HUMAN);contains Alu repetitive element;. ------------------------------------------------------------ clusterID = 10 # of genes = 23 -------------------------- [1] D55673 D55673 Hsa.3209 gene 1 Human mRNA for heterogeneous nuclear ribonucleoprotein D (hnRNP D). [2] H15813 H15813 Hsa.34914 3' UTR 2a 159537 CCAAT/ENHANCER BINDING PROTEIN BETA (Homo sapiens) [3] D31887(1) D31887 Hsa.3154 gene 1 "Human mRNA (KIAA0062) for ORF (novel protein), partial cds. " [4] R37114 R37114 Hsa.3876 3' UTR 2a 26050 PROBABLE SERINE/THREONINE-PROTEIN KINASE YHR102W (Saccharomyces cerevisiae) [5] X03484 X03484 Hsa.2975 gene 1 Human mRNA for raf oncogene. [6] H28373 H28373 Hsa.35804 3' UTR 2a 161909 T-CELL PROTEIN-TYROSINE PHOSPHATASE (Homo sapiens) [7] X61587(1) X61587 Hsa.2986 gene 1 H.sapiens rhoG mRNA for GTPase. [8] X78817 X78817 Hsa.3166 gene 1 H.sapiens partial C1 mRNA. [9] T55840 T55840 Hsa.3410 3' UTR 2a 77661 TUMOR-ASSOCIATED ANTIGEN L6 (Homo sapiens) [10] X61587(2) X61587 Hsa.2986 gene 1 H.sapiens rhoG mRNA for GTPase. [11] U02020 U02020 Hsa.326 gene 1 "Human pre-B cell enhancing factor (PBEF) mRNA, complete cds. " [12] M55543 M55543 Hsa.3118 gene 1 INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 2 (HUMAN);. [13] H25940 H25940 Hsa.28468 3' UTR 2a 162266 PUTATIVE SERINE/THREONINE-PROTEIN KINASE PSK-H1 (Homo sapiens) [14] H02540 H02540 Hsa.3764 3' UTR 1 151270 CATHEPSIN L PRECURSOR (HUMAN);. [15] D31887(2) D31887 Hsa.3154 gene 1 "Human mRNA (KIAA0062) for ORF (novel protein), partial cds. " [16] Z15115 Z15115 Hsa.3071 gene 1 H.sapiens TOP2 mRNA for DNA topoisomerase II (partial). [17] R56630 R56630 Hsa.28641 3' UTR 2a 41088 MYOSIN HEAVY CHAIN KINASE A (Dictyostelium discoideum) [18] X79353 X79353 Hsa.3104 gene 1 H.sapiens XAP-4 mRNA for GDP-dissociation inhibitor. [19] X13482 X13482 Hsa.3093 gene 1 U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A' (HUMAN);contains MER22 repetitive element ;. [20] X73478 X73478 Hsa.2968 gene 1 H.sapiens hPTPA mRNA. [21] X63469 X63469 Hsa.3061 gene 1 TRANSCRIPTION INITIATION FACTOR IIE-BETA CHAIN (HUMAN);contains element MER1 repetitive element ;. [22] R75893(2) R75893 Hsa.32745 3' UTR 2a 143670 PROBABLE G PROTEIN-COUPLED RECEPTOR 6H1 FROM T-CELLS (Gallus gallus) [23] U22431 U22431 Hsa.3223 gene 1 "Human hypoxia-inducible factor 1 alpha (HIF-1 alpha) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 11 # of genes = 29 -------------------------- [1] X62153 X62153 Hsa.2917 gene 1 H.sapiens mRNA for P1 protein (P1.h). [2] X02875 X02875 Hsa.3299 gene 1 "Human mRNA (3'-fragment) for (2'-5') oligo A synthetase E (1,8 kb RNA). " [3] R72374 R72374 Hsa.31943 3' UTR 2a 155897 "CALPAIN I, LARGE (Oryctolagus cuniculus) " [4] Z48541 Z48541 Hsa.28914 gene 1 H.sapiens mRNA for protein tyrosine phosphatase. [5] T60318 T60318 Hsa.3194 3' UTR 1 78472 A42811 INITIATION FACTOR EIF-4A HOMOLOG - ;. [6] H43663 H43663 Hsa.36938 3' UTR 2a 188406 TEASHIRT PROTEIN (Drosophila melanogaster) [7] H46136 H46136 Hsa.37058 3' UTR 2a 177791 HOMEOBOX PROTEIN HOX-A10 (Homo sapiens) [8] U09413 U09413 Hsa.359 gene 1 "Human zinc finger protein ZNF135 mRNA, complete cds. " [9] H11272 H11272 Hsa.34384 3' UTR 2a 47327 COMPLEMENT C9 (Oncorhynchus mykiss) [10] H45781 H45781 Hsa.37038 3' UTR 2a 188277 [11] X66839 X66839 Hsa.2856 gene 1 H.sapiens MaTu MN mRNA for p54/58N protein. [12] R23176 R23176 Hsa.3940 3' UTR 2a 131348 AMYLOID-LIKE PROTEIN 2 PRECURSOR (Homo sapiens) [13] X13451 X13451 Hsa.3298 gene 1 Human mRNA for lymphocyte lineage-restricted mb-1 membrane glycoprotein C-term. (m-mb-1 homolog.). [14] X80910 X80910 Hsa.2955 gene 1 H.sapiens PPP1CB mRNA. [15] M95627 M95627 Hsa.3212 gene 1 "Homo sapiens angio-associated migratory cell protein (AAMP) mRNA, complete cds. " [16] H40137 H40137 Hsa.37541 3' UTR 2a 191720 IRON-RESPONSIVE ELEMENT BINDING PROTEIN (Homo sapiens) [17] R97912 R97912 Hsa.39753 3' UTR 2a 200181 SERINE/THREONINE-PROTEIN KINASE IPL1 (Saccharomyces cerevisiae) [18] H47650 H47650 Hsa.37818 3' UTR 2a 193667 "PTS SYSTEM, SUCROSE-SPECIFIC IIABC COMPONENT (Pediococcus pentosaceus) " [19] R76863 R76863 Hsa.32865 3' UTR 2a 143949 DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (Caenorhabditis elegans) [20] U35116 U35116 Hsa.3867 gene 1 "Human ubiquitin isopeptidase T mRNA, complete cds. " [21] X80497 X80497 Hsa.3269 gene 1 H.sapiens PHKLA mRNA. [22] X12791 X12791 Hsa.2997 gene 1 Human mRNA for 19kD protein of signal recognition particle (SRP). [23] U03090 U03090 Hsa.290 gene 1 "Human Ca2+-dependent phospholipase A2 mRNA, complete cds. " [24] H42127 H42127 Hsa.33338 3' UTR 2a 182397 PEANUT PROTEIN (Drosophila melanogaster) [25] R72644 R72644 Hsa.32535 3' UTR 2a 156489 CHOLINE KINASE (Homo sapiens) [26] H05814 H05814 Hsa.33967 3' UTR 2a 44151 PUTATIVE ATP-DEPENDENT RNA HELICASE C06E1.10 IN CHROMOSOME III (Caenorhabditis elegans) [27] H28704 H28704 Hsa.29940 3' UTR 2a 49974 RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 1 (Homo sapiens) [28] X63629 X63629 Hsa.2928 gene 1 H.sapiens mRNA for p cadherin. [29] V00520 V00520 Hsa.41108 gene 1 Human germ line gene for growth hormone (presomatotropin). ------------------------------------------------------------ clusterID = 12 # of genes = 1 -------------------------- [1] R80427 R80427 Hsa.33268 3' UTR 2a 147223 C4-DICARBOXYLATE TRANSPORT SENSOR PROTEIN DCTB (Rhizobium leguminosarum) ------------------------------------------------------------ clusterID = 13 # of genes = 18 -------------------------- [1] J02763 J02763 Hsa.6080 gene 1 "Human calcyclin gene, complete cds. " [2] T95018 T95018 Hsa.4689 3' UTR 2a 120032 40S RIBOSOMAL PROTEIN S18 (Homo sapiens) [3] T61609 T61609 Hsa.878 3' UTR 1 78081 LAMININ RECEPTOR (HUMAN);. [4] T57619 T57619 Hsa.8068 3' UTR 2a 75437 40S RIBOSOMAL PROTEIN S6 (Nicotiana tabacum) [5] T58861 T58861 Hsa.5398 3' UTR 2a 77563 60S RIBOSOMAL PROTEIN L30E (Kluyveromyces lactis) [6] control(5) control UMGAP [7] control(6) control UMGAP [8] control(7) control UMGAP [9] control(8) control UMGAP [10] R01182 R01182 Hsa.5363 3' UTR 1 123748 60S RIBOSOMAL PROTEIN L38 (HUMAN);. [11] T48804 T48804 Hsa.5444 3' UTR 1 70269 40S RIBOSOMAL PROTEIN S24 (HUMAN). [12] T72938 T72938 Hsa.954 3' UTR 1 84350 QM PROTEIN (HUMAN);. [13] T47144 T47144 Hsa.489 3' UTR 1 74837 JN0549 RIBOSOMAL PROTEIN YL30. [14] R85464 R85464 Hsa.73 3' UTR 1 179999 ATP SYNTHASE LIPID-BINDING PROTEIN P2 PRECURSOR (HUMAN);. [15] T62856 T62856 Hsa.537 3' UTR 1 79571 P09895 60S RIBOSOMAL PROTEIN ;. [16] M16937 M16937 Hsa.823 gene 1 "Human homeo box c1 protein, mRNA, complete cds. " [17] U26401 U26401 Hsa.41279 gene 1 "Human galactokinase (galK) mRNA, complete cds. " [18] L09604 L09604 Hsa.562 gene 1 INTESTINAL MEMBRANE A4 PROTEIN (HUMAN);. ------------------------------------------------------------ clusterID = 14 # of genes = 38 -------------------------- [1] R78934 R78934 Hsa.10755 3' UTR 2a 146232 ENDOTHELIAL ACTIN-BINDING PROTEIN (Homo sapiens) [2] H82746 H82746 Hsa.1070 3' UTR 1 249172 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C (HUMAN);. [3] L26405(1) L26405 Hsa.1719 gene 1 "Homo sapiens (huc) mRNA, complete cds. " [4] T91043 T91043 Hsa.17256 3' UTR 2a 112500 TYROSINE-PROTEIN KINASE RECEPTOR UFO PRECURSOR (Homo sapiens) [5] Z11692 Z11692 Hsa.1166 gene 1 H.sapiens mRNA for elongation factor 2. [6] M69238 M69238 Hsa.1263 gene 1 "Human aryl hydrocarbon receptor nuclear translocator (ARNT) mRNA, complete cds. " [7] T59406 T59406 Hsa.11352 3' UTR 2a 75852 LYMPHOID ENHANCER BINDING FACTOR 1 (Mus musculus) [8] D13315(1) D13315 Hsa.103 gene 1 LACTOYLGLUTATHIONE LYASE (HUMAN);contains Alu repetitive element;. [9] U05681 U05681 Hsa.1276 gene 1 "Human proto-oncogene (BCL3) gene, exons 3-9 and complete cds. " [10] T72503 T72503 Hsa.153 3' UTR 1 82534 60S RIBOSOMAL PROTEIN L7 (HUMAN);. [11] T70197 T70197 Hsa.13007 3' UTR 2a 81043 RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 (Homo sapiens) [12] T72403 T72403 Hsa.13110 3' UTR 2a 86225 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ(3) ALPHA CHAIN PRECURSOR (Homo sapiens) " [13] T64941 T64941 Hsa.13670 3' UTR 2a 66800 SERINE PROTEASE HEPSIN (Homo sapiens) [14] M94250 M94250 Hsa.1678 gene 1 "Human retinoic acid inducible factor (MK) gene exons 1-5, complete cds. " [15] L36844 L36844 Hsa.1164 gene 1 "Homo sapiens (clone p15INK4B/HA5) CDK inhibitory protein mRNA, complete cds. " [16] R54854 R54854 Hsa.11765 3' UTR 2a 154475 VON WILLEBRAND FACTOR PRECURSOR (Homo sapiens) [17] M91670 M91670 Hsa.1668 gene 1 "Human ubiquitin carrier protein (E2-EPF) mRNA, complete cds. " [18] M57298 M57298 Hsa.1486 gene 1 "Human GTP-binding protein G25K mRNA, complete cds. " [19] T69271 T69271 Hsa.12892 3' UTR 2a 82871 SEX HORMONE-BINDING GLOBULIN PRECURSOR (Homo sapiens) [20] M34192(1) M34192 Hsa.1522 gene 1 ISOVALERYL-COA DEHYDROGENASE PRECURSOR (HUMAN);contains MER22 repetitive element ;. [21] T89164 T89164 Hsa.12024 3' UTR 2a 109993 HYPOTHETICAL 18.8 KD PROTEIN ZK637.14 IN CHROMOSOME III (Caenorhabditis elegans) [22] R70008 R70008 Hsa.10171 3' UTR 2a 142450 VASCULAR ENDOTHELIAL GROWTH FACTOR PRECURSOR (Rattus norvegicus) [23] T59354 T59354 Hsa.11340 3' UTR 2a 75292 EBNA-2 NUCLEAR PROTEIN (Epstein-barr virus) [24] H26419 H26419 Hsa.1259 3' UTR 1 162182 APOLIPOPROTEIN D PRECURSOR (HUMAN);. [25] L03840 L03840 Hsa.1433 gene 1 "Human fibroblast growth factor receptor 4 (FGFR4) mRNA, complete cds. " [26] H09149 H09149 Hsa.13023 3' UTR 2a 46513 ASIALOGLYCOPROTEIN RECEPTOR R2/3 (Rattus norvegicus) [27] H11719 H11719 Hsa.1317 3' UTR 1 47679 MONOCYTE DIFFERENTIATION ANTIGEN CD14 PRECURSOR (HUMAN);. [28] L27670 L27670 Hsa.1798 gene 1 "Human Landsteiner-Wiener blood group glycoprotein (LW) mRNA, complete cds. " [29] R38513(2) R38513 Hsa.16742 3' UTR 2a 26871 FIBROBLAST GROWTH FACTOR RECEPTOR 2 PRECURSOR (Homo sapiens) [30] T72599 T72599 Hsa.13610 3' UTR 2a 22159 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [31] M65105 M65105 Hsa.1860 gene 1 SODIUM-DEPENDENT NORADRENALINE TRANSPORTER (HUMAN);contains Alu repetitive element;. [32] M22488 M22488 Hsa.1283 gene 1 Human bone morphogenetic protein 1 (BMP-1) mRNA. [33] D13315(2) D13315 Hsa.103 gene 1 LACTOYLGLUTATHIONE LYASE (HUMAN);contains Alu repetitive element;. [34] T64885 T64885 Hsa.13628 3' UTR 2a 66711 GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 1 (Saccharomyces cerevisiae) [35] T52905 T52905 Hsa.10240 3' UTR 2a 68116 "NEURONAL ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA-2 CHAIN PRECURSOR (Gallus gallus) " [36] L26405(2) L26405 Hsa.1719 gene 1 "Homo sapiens (huc) mRNA, complete cds. " [37] T85165 T85165 Hsa.16714 3' UTR 2a 111345 SRC SUBSTRATE P80/85 PROTEINS (Gallus gallus) [38] R74066 R74066 Hsa.10659 3' UTR 2a 156919 DNA DAMAGE RESPONSE PROTEIN KINASE DUN1 (Saccharomyces cerevisiae) ------------------------------------------------------------ clusterID = 15 # of genes = 2 -------------------------- [1] T56604 T56604 Hsa.6472 3' UTR 2a 73143 TUBULIN BETA CHAIN (Haliotis discus) [2] M85079 M85079 Hsa.2058 gene 1 "Human TGF-beta type II receptor mRNA, complete cds. " ------------------------------------------------------------ clusterID = 16 # of genes = 3 -------------------------- [1] X67325(1) X67325 Hsa.2918 gene 1 H.sapiens p27 mRNA. [2] X02492 X02492 Hsa.3353 gene 1 INTERFERON-INDUCED PROTEIN 6-16 PRECURSOR (HUMAN);contains L1 repetitive element ;. [3] X67325(2) X67325 Hsa.2918 gene 1 H.sapiens p27 mRNA. ------------------------------------------------------------ clusterID = 17 # of genes = 6 -------------------------- [1] T64974 T64974 Hsa.8301 3' UTR 2a 66833 BETA-3 ADRENERGIC RECEPTOR (Homo sapiens) [2] H92195 H92195 Hsa.33144 3' UTR 2a 221798 EBV-INDUCED G PROTEIN-COUPLED RECEPTOR 1 PRECURSOR (Homo sapiens) [3] X59842 X59842 Hsa.2926 gene 1 Human PBX2 mRNA. [4] H28050 H28050 Hsa.36025 3' UTR 2a 182000 FK506-BINDING PROTEIN PRECURSOR (Mus musculus) [5] R73606 R73606 Hsa.3954 3' UTR 2a 141558 "5'-AMP-ACTIVATED PROTEIN KINASE, GAMMA CHAIN (Rattus norvegicus) " [6] H13292 H13292 Hsa.9340 3' UTR 2a 148374 RNA-BINDING PROTEIN FUS/TLS (Homo sapiens) ------------------------------------------------------------ clusterID = 18 # of genes = 3 -------------------------- [1] X75208 X75208 Hsa.2967 gene 1 H.sapiens HEK2 mRNA for protein tyrosine kinase receptor. [2] K03474(1) K03474 Hsa.41098 gene 1 "Human Mullerian inhibiting substance gene, complete cds. " [3] K03474(2) K03474 Hsa.41098 gene 1 "Human Mullerian inhibiting substance gene, complete cds. " ------------------------------------------------------------ clusterID = 19 # of genes = 35 -------------------------- [1] T62878 T62878 Hsa.689 3' UTR 1 79597 CYTOCHROME C OXIDASE POLYPEPTIDE IV PRECURSOR (HUMAN);. [2] T93589 T93589 Hsa.4316 3' UTR 2a 118042 TUBULIN ALPHA-6 CHAIN (Mus musculus) [3] M14200(1) M14200 Hsa.733 gene 1 "Human diazepam binding inhibitor (DBI) mRNA, complete cds. " [4] Z48950 Z48950 Hsa.6146 gene 1 H.sapiens hH3.3B gene for histone H3.3. [5] L12168 L12168 Hsa.570 gene 1 "Homo sapiens adenylyl cyclase-associated protein (CAP) mRNA, complete cds. " [6] R21547 R21547 Hsa.7498 3' UTR 2a 130227 TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0 (Bovine herpesvirus type 1) [7] T51613 T51613 Hsa.921 3' UTR 1 72433 UBIQUINOL-CYTOCHROME C REDUCTASE 11 KD PROTEIN (HUMAN). [8] R00282 R00282 Hsa.5537 3' UTR 2a 123276 GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) GAMMA-7 SUBUNIT (Bos taurus) [9] R61359 R61359 Hsa.6633 3' UTR 2a 37866 BASIGIN PRECURSOR (Gallus gallus) [10] D00761 D00761 Hsa.59 gene 1 PROTEASOME COMPONENT C5 (HUMAN);. [11] H77348 H77348 Hsa.41875 3' UTR 2a 233563 5-LIPOXYGENASE ACTIVATING PROTEIN (Macaca mulatta) [12] T51499 T51499 Hsa.470 3' UTR 1 71494 A42792 SUCCINATE DEHYDROGENASE. [13] H17897 H17897 Hsa.608 3' UTR 1 50396 "ADP,ATP CARRIER PROTEIN, FIBROBLAST ISOFORM (HUMAN);. " [14] T51250 T51250 Hsa.5402 3' UTR 1 70115 CYTOCHROME C OXIDASE POLYPEPTIDE VIII-LIVER/HEART (HUMAN). [15] M14200(2) M14200 Hsa.733 gene 1 "Human diazepam binding inhibitor (DBI) mRNA, complete cds. " [16] T65438 T65438 Hsa.4251 3' UTR 2a 21650 PRE-MRNA SPLICING FACTOR SRP20 (Homo sapiens) [17] H09137 H09137 Hsa.688 3' UTR 1 46399 UBIQUINOL-CYTOCHROME C REDUCTASE CORE PROTEIN 2 PRECURSOR (HUMAN);. [18] L07395 L07395 Hsa.428 gene 1 PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT (HUMAN);. [19] H89477 H89477 Hsa.45732 3' UTR 2a 240171 G1/S-SPECIFIC CYCLIN D3 (Homo sapiens) [20] M22632 M22632 Hsa.602 gene 1 "Human mitochondrial aspartate aminotransferase mRNA, complete cds. " [21] T70062 T70062 Hsa.490 3' UTR 1 80945 "Human nuclear factor NF45 mRNA, complete cds. " [22] Z18538 Z18538 Hsa.41208 gene 1 H.sapiens encoding skin-derived antileukoproteinase. [23] T40849 T40849 Hsa.440 3' UTR 1 61286 "P12805 G10 ,. " [24] R93337 R93337 Hsa.8833 3' UTR 2a 275889 HOMEOTIC GENE REGULATOR (Drosophila melanogaster) [25] M61199 M61199 Hsa.694 gene 1 "Human cleavage signal 1 protein mRNA, complete cds. " [26] R55310 R55310 Hsa.442 3' UTR 1 154810 S36390 MITOCHONDRIAL PROCESSING PEPTIDASE ;. [27] D78152 D78152 Hsa.975 gene 1 Human mRNA for annexin IV (carbohydrate-binding protein p33/41). [28] T84481 T84481 Hsa.7459 3' UTR 2a 111401 PHOSPHORYLASE B KINASE BETA REGULATORY CHAIN (Oryctolagus cuniculus) [29] L25616 L25616 Hsa.667 gene 1 "Human CG1 protein mRNA, complete cds. " [30] U24166 U24166 Hsa.7462 gene 1 "Human EB1 mRNA, complete cds. " [31] M74524 M74524 Hsa.814 gene 1 "Human HHR6A (yeast RAD 6 homologue) mRNA, complete cds. " [32] M77477 M77477 Hsa.578 gene 1 "Human aldehyde dehydrogenase mRNA, complete cds. " [33] D10523 D10523 Hsa.481 gene 1 "Human mRNA for 2-oxoglutarate dehydrogenase, complete cds. " [34] X73424 X73424 Hsa.41239 gene 1 PROPIONYL-COA CARBOXYLASE BETA CHAIN (HUMAN);. [35] H88876 H88876 Hsa.45658 3' UTR 2a 253168 CD9 ANTIGEN (Homo sapiens) ------------------------------------------------------------ clusterID = 20 # of genes = 7 -------------------------- [1] M76378(1) M76378 Hsa.692 gene 1 "Human cysteine-rich protein (CRP) gene, exons 5 and 6. " [2] M63391 M63391 Hsa.8147 gene 1 "Human desmin gene, complete cds. " [3] M76378(2) M76378 Hsa.692 gene 1 "Human cysteine-rich protein (CRP) gene, exons 5 and 6. " [4] R87126 R87126 Hsa.37937 3' UTR 2a 197371 "MYOSIN HEAVY CHAIN, NONMUSCLE (Gallus gallus) " [5] M76378(3) M76378 Hsa.692 gene 1 "Human cysteine-rich protein (CRP) gene, exons 5 and 6. " [6] L05144 L05144 Hsa.1902 gene 1 "PHOSPHOENOLPYRUVATE CARBOXYKINASE, CYTOSOLIC (HUMAN);contains Alu repetitive element;contains element PTR5 repetitive element ;. " [7] J02854 J02854 Hsa.1832 gene 1 "MYOSIN REGULATORY LIGHT CHAIN 2, SMOOTH MUSCLE ISOFORM (HUMAN);contains element TAR1 repetitive element ;. " ------------------------------------------------------------ clusterID = 21 # of genes = 1 -------------------------- [1] R99907 R99907 Hsa.8192 3' UTR 2a 201673 INTERFERON REGULATORY FACTOR 2 (Homo sapiens) ------------------------------------------------------------ clusterID = 22 # of genes = 3 -------------------------- [1] T62972 T62972 Hsa.285 3' UTR 1 80738 P02403 60S RIBOSOMAL PROTEIN ;. [2] X02761 X02761 Hsa.2706 gene 1 Human mRNA for fibronectin (FN precursor). [3] X60489 X60489 Hsa.2688 gene 1 Human mRNA for elongation factor-1-beta. ------------------------------------------------------------ clusterID = 23 # of genes = 14 -------------------------- [1] M33680 M33680 Hsa.1098 gene 1 "Human 26-kDa cell surface protein TAPA-1 mRNA, complete cds. " [2] U13896 U13896 Hsa.1175 gene 1 "Human homolog of Drosophila discs large protein, isoform 2 (hdlg-2) mRNA, complete cds. " [3] T48939 T48939 Hsa.1071 3' UTR 1 70496 yb07e05.s1 Homo sapiens cDNA clone 70496 3' contains MER22 repetitive element. [4] M87503 M87503 Hsa.1724 gene 1 TRANSCRIPTIONAL REGULATOR ISGF3 GAMMA SUBUNIT (HUMAN);. [5] L13939 L13939 Hsa.1642 gene 1 "Human beta adaptin protein mRNA, complete cds. " [6] M14764(1) M14764 Hsa.1855 gene 1 LOW-AFFINITY NERVE GROWTH FACTOR RECEPTOR PRECURSOR (HUMAN);. [7] M80613 M80613 Hsa.1554 gene 1 "Human homolog of Drosophila female sterile homeotic mRNA, complete cds. " [8] M98343 M98343 Hsa.1672 gene 1 "Homo sapiens amplaxin (EMS1) mRNA, complete cds. " [9] D43951 D43951 Hsa.1618 gene 1 "Human mRNA (KIAA0099) for ORF (fruit fly pumilio gene-related), complete cds. " [10] T52624 T52624 Hsa.10169 3' UTR 1 67178 H.sapiens mRNA for processing a-glucosidase I. [11] M32315 M32315 Hsa.1122 gene 1 TUMOR NECROSIS FACTOR RECEPTOR 2 PRECURSOR (HUMAN);contains THR.t3 THR repetitive element ;. [12] L36818 L36818 Hsa.1163 gene 1 "Human (clone 51C-3) 51C protein mRNA, complete cds. " [13] M85169 M85169 Hsa.1057 gene 1 "Human homologue of yeast sec7 mRNA, complete cds. " [14] X89985 X89985 Hsa.17514 gene 1 H.sapiens mRNA for BCL7B protein. ------------------------------------------------------------ clusterID = 24 # of genes = 18 -------------------------- [1] T73092 T73092 Hsa.9251 3' UTR 2a 85983 EUKARYOTIC INITIATION FACTOR 4A-I (Homo sapiens) [2] R39130 R39130 Hsa.964 3' UTR 1 26585 S27965 HYPOTHETICAL PROTEIN - ;. [3] R01755 R01755 Hsa.7852 3' UTR 2a 124172 TRANSTHYRETIN PRECURSOR (Homo sapiens) [4] R46069 R46069 Hsa.7554 3' UTR 2a 35925 MEROZOITE SURFACE ANTIGENS PRECURSOR (Plasmodium falciparum) [5] X90529 X90529 Hsa.8232 gene 1 H.sapiens mRNA for ragA protein. [6] L08069 L08069 Hsa.94 gene 1 "Human heat shock protein, E. coli DnaJ homologue mRNA, complete cds. " [7] D31716 D31716 Hsa.41338 gene 1 "Human mRNA for GC box bindig protein, complete cds. " [8] T50508 T50508 Hsa.9872 3' UTR 2a 77141 TRANSCRIPTION INITIATION PROTEIN SPT4 (Saccharomyces cerevisiae) [9] R42798 R42798 Hsa.904 3' UTR 1 32327 A34421 MALE-ENHANCED ANTIGEN - ;. [10] R44740 R44740 Hsa.7348 3' UTR 2a 33826 DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1 (Xenopus laevis) [11] D00762 D00762 Hsa.60 gene 1 PROTEASOME COMPONENT C8 (HUMAN);. [12] J03239 J03239 Hsa.728 gene 1 "Human c-erbA-alpha-2 gene encoding thyroid hormone receptor type alpha-2 mRNA, complete cds, clone hTR-alpha-2. " [13] L11373 L11373 Hsa.981 gene 1 "Human protocadherin 43 mRNA, complete cds for abbreviated PC43. " [14] M94203 M94203 Hsa.902 gene 1 "Homo sapiens protein kinase gene, 3' end of cds and trinucleotide repeat region. " [15] M32313 M32313 Hsa.555 gene 1 "Human steroid 5-alpha-reductase mRNA, complete cds. " [16] U20141 U20141 Hsa.952 gene 1 "Human inducible nitric oxide synthase mRNA, complete cds. " [17] R96070 R96070 Hsa.4296 3' UTR 2a 230955 DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN DRG (Mus musculus) [18] L47162 L47162 Hsa.41368 gene 1 "Human fatty aldehyde dehydrogenase (FALDH) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 25 # of genes = 1 -------------------------- [1] T47377 T47377 Hsa.3016 3' UTR 1 71035 S-100P PROTEIN (HUMAN). ------------------------------------------------------------ clusterID = 26 # of genes = 24 -------------------------- [1] D14812 D14812 Hsa.2487 gene 1 "Human mRNA for ORF, complete cds. " [2] R01157 R01157 Hsa.20524 3' UTR 2a 124858 "HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, C-4 ALPHA CHAIN (Homo sapiens) " [3] R33367 R33367 Hsa.26528 3' UTR 2a 135815 MEMBRANE COFACTOR PROTEIN PRECURSOR (Homo sapiens) [4] M14016 M14016 Hsa.2089 gene 1 UROPORPHYRINOGEN DECARBOXYLASE (HUMAN);contains element PTR5 repetitive element ;. [5] L10413 L10413 Hsa.275 gene 1 "Human farnesyltransferase alpha-subunit mRNA, complete cds. " [6] X63071 X63071 Hsa.2274 gene 1 H.sapiens mRNA for novel DNA binding protein. [7] R20554 R20554 Hsa.2157 3' UTR 1 26366 PROBABLE PROTEIN DISULFIDE ISOMERASE ER-60 PRECURSOR (HUMAN);. [8] U10117(1) U10117 Hsa.2152 gene 1 "Human endothelial-monocyte activating polypeptide II mRNA, complete cds. " [9] Z23064 Z23064 Hsa.2777 gene 1 H.sapiens mRNA gene for hnRNP G protein. [10] U10117(2) U10117 Hsa.2152 gene 1 "Human endothelial-monocyte activating polypeptide II mRNA, complete cds. " [11] X78549 X78549 Hsa.2609 gene 1 H.sapiens brk mRNA for tyrosine kinase. [12] U04953 U04953 Hsa.229 gene 1 "Human isoleucyl-tRNA synthetase mRNA, complete cds. " [13] X17644 X17644 Hsa.2756 gene 1 Human GST1-Hs mRNA for GTP-binding protein. [14] U22055 U22055 Hsa.2451 gene 1 "Human 100 kDa coactivator mRNA, complete cds. " [15] H47107 H47107 Hsa.22242 3' UTR 2a 193455 MITOCHONDRIAL PROTEIN IMPORT PROTEIN 2 (Saccharomyces cerevisiae) [16] R48303 R48303 Hsa.27537 3' UTR 2a 153505 TYROSINE RICH ACIDIC MATRIX PROTEIN (Bos taurus) [17] U13991 U13991 Hsa.2154 gene 1 "Human TATA-binding protein associated factor 30 kDa subunit (tafII30) mRNA, complete cds. " [18] R94513 R94513 sa.19001 3' UTR 2a 197667 SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 2 (Homo sapiens) [19] L27841 L27841 Hsa.1917 gene 1 "Human autoantigen pericentriol material 1 (PCM-1) mRNA, complete cds. " [20] R71585 R71585 Hsa.20376 3' UTR 2a 142870 EBNA-2 NUCLEAR PROTEIN (Epstein-barr virus) [21] U18299 U18299 Hsa.2199 gene 1 "Human damage-specific DNA binding protein DDBa p127 subunit (DDB1) mRNA, complete cds. " [22] R49719 R49719 Hsa.24490 3' UTR 2a 38755 GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-4 SUBUNIT PRECURSOR (Gallus gallus) [23] M58050 M58050 Hsa.2196 gene 1 "Human membrane cofactor protein (MCP) mRNA, complete cds. " [24] X56597 X56597 Hsa.2705 gene 1 Human humFib mRNA for fibrillarin. ------------------------------------------------------------ clusterID = 27 # of genes = 2 -------------------------- [1] X86693 X86693 Hsa.2344 gene 1 H.sapiens mRNA for hevin like protein. [2] H06524 H06524 Hsa.2291 3' UTR 1 44386 "GELSOLIN PRECURSOR, PLASMA (HUMAN);. " ------------------------------------------------------------ clusterID = 28 # of genes = 11 -------------------------- [1] Z29677 Z29677 Hsa.3010 gene 1 H.sapiens mRNA for ras-related GTP-binding protein. [2] D17400 D17400 Hsa.367 gene 1 "Human mRNA for 6-pyruvoyl-tetrahydropterin synthase, complete cds. " [3] H10925 H10925 Hsa.34510 3' UTR 2a 47022 PIM-1 PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE (Mus musculus) [4] Z29505 Z29505 Hsa.2904 gene 1 H.sapiens mRNA for nucleic acid binding protein sub2.3. [5] U26312 U26312 Hsa.3263 gene 1 "Human heterochromatin protein HP1Hs-gamma mRNA, partial cds. " [6] R11485 R11485 Hsa.2867 3' UTR 1 128156 PROTEASOME ZETA CHAIN (HUMAN);. [7] Z25521 Z25521 Hsa.2818 gene 1 "H.sapiens integrin associated protein mRNA, complete CDS,. " [8] U28686 U28686 Hsa.3230 gene 1 "Human putative RNA binding protein RNPL mRNA, complete cds. " [9] D00596 D00596 Hsa.3083 gene 1 "Human thymidylate syntase (EC 2.1.1.45) gene, complete cds. " [10] X53586 X53586 Hsa.2821 gene 1 Human mRNA for integrin alpha 6. [11] R59583 R59583 Hsa.28784 3' UTR 2a 41999 PRE-MRNA SPLICING FACTOR SRP75 (Homo sapiens) ------------------------------------------------------------ clusterID = 29 # of genes = 7 -------------------------- [1] T49941 T49941 Hsa.8831 3' UTR 1 69828 PUTATIVE INSULIN-LIKE GROWTH FACTOR II ASSOCIATED (HUMAN). [2] T51852 T51852 Hsa.2095 3' UTR 1 75026 VIMENTIN (HUMAN). [3] J03040 J03040 Hsa.2014 gene 1 SPARC PRECURSOR (HUMAN);contains MSR1 repetitive element ;. [4] H41129 H41129 Hsa.879 3' UTR 1 175539 GALECTIN-1 (HUMAN);contains Alu repetitive element;. [5] U21128 U21128 Hsa.2135 gene 1 "Human lumican mRNA, complete cds. " [6] J03210 J03210 Hsa.680 gene 1 "Human collagenase type IV mRNA, 3' end. " [7] T95046 T95046 Hsa.6484 3' UTR 2a 120085 PROTEASE DO PRECURSOR (Escherichia coli) ------------------------------------------------------------ clusterID = 30 # of genes = 4 -------------------------- [1] control(9) control i [2] control(10) control i [3] control(11) control i [4] control(12) control i ------------------------------------------------------------ clusterID = 31 # of genes = 1 -------------------------- [1] H11125 H11125 Hsa.8121 3' UTR 2a 48206 G1/S-SPECIFIC CYCLIN D2 (Homo sapiens) ------------------------------------------------------------ clusterID = 32 # of genes = 1 -------------------------- [1] R89823 R89823 Hsa.38171 3' UTR 2a 194668 INORGANIC PYROPHOSPHATASE (Bos taurus) ------------------------------------------------------------ clusterID = 33 # of genes = 38 -------------------------- [1] X51346 X51346 Hsa.2831 gene 1 Human jun-D mRNA for JUN-D protein. [2] H28452 H28452 Hsa.36074 3' UTR 2a 181783 BRAIN CALCIUM CHANNEL BI-2 PROTEIN (Oryctolagus cuniculus) [3] D30655 D30655 Hsa.338 gene 1 Human mRNA for eukaryotic initiation factor 4AII. [4] M22806 M22806 Hsa.3295 gene 1 "Human prolyl 4-hydroxylase beta-subunit and disulfide isomerase (P4HB) gene, exon 11, clones 6B-(1,3,5,6). " [5] R92729(1) R92729 Hsa.38375 3' UTR 2a 195957 X BOX BINDING PROTEIN-1 (Homo sapiens) [6] R95874 R95874 Hsa.39432 3' UTR 2a 199264 RETROVIRUS-RELATED ENV POLYPROTEIN (Homo sapiens) [7] X57206 X57206 Hsa.2829 gene 1 H.sapiens mRNA for 1D-myo-inositol-trisphosphate 3-kinase B isoenzyme. [8] Z11584 Z11584 Hsa.2905 gene 1 H.sapiens mRNA for NuMA protein. [9] U28963 U28963 Hsa.3307 gene 1 "Human Gps2 (GPS2) mRNA, complete cds. " [10] X72389 X72389 Hsa.2952 gene 1 H.sapiens mRNA for 4-hydroxyphenylpyruvate dioxygenase. [11] R56070 R56070 Hsa.28145 3' UTR 2a 40682 PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 45 KD SUBUNIT (Homo sapiens) [12] R49855 R49855 Hsa.3852 3' UTR 2a 152637 COAGULATION FACTOR V PRECURSOR (Homo sapiens) [13] M37984(1) M37984 Hsa.3069 gene 1 "Human slow twitch skeletal muscle/cardiac muscle troponin C gene, complete cds. " [14] H17108 H17108 Hsa.35000 3' UTR 2a 50959 GTP-BINDING PROTEIN HFLX (Escherichia coli) [15] Z49199 Z49199 Hsa.3185 gene 1 H.sapiens mRNA for RNA polymerase II subunit hRPB17. [16] U30827 U30827 Hsa.3454 gene 1 "Human splicing factor SRp40-3 (SRp40) mRNA, complete cds. " [17] D31883(2) D31883 Hsa.3150 gene 1 "Human mRNA (KIAA0059) for ORF (related to actin bundling protein dematn), complete cds. " [18] R94588 R94588 Hsa.39288 3' UTR 2a 276282 CELL DIVISION PROTEIN KINASE 2 (HUMAN);. [19] X68148 X68148 Hsa.3022 gene 1 H.sapiens SHC mRNA. [20] D25216 D25216 Hsa.3159 gene 1 "Human mRNA (KIAA0014) for ORF, complete cds. " [21] R92729(2) R92729 Hsa.38375 3' UTR 2a 195957 X BOX BINDING PROTEIN-1 (Homo sapiens) [22] U18920 U18920 Hsa.3260 gene 1 "Human chromosome 17q12-21 mRNA, clone pOV-3, partial cds. " [23] U01877 U01877 Hsa.370 gene 1 "Human p300 protein mRNA, complete cds. " [24] T78104 T78104 Hsa.3239 3' UTR 1 114499 "Human proline- arginine-rich end leucine-rich repeat protein PRELP mRNA, complete cds. " [25] L41268 L41268 Hsa.3274 gene 1 "Homo sapiens natural killer-associated transcript 2 (NKAT2) mRNA, complete cds. " [26] X74874 X74874 Hsa.2999 gene 1 "H.sapiens gene for RNA pol II largest subunit, exon 1. " [27] T49637 T49637 Hsa.3145 3' UTR 1 67743 "Human mRNA (KIAA0064) for ORF (novel protein), complete cds. " [28] H05910 H05910 Hsa.28186 3' UTR 2a 43545 [29] R99230 R99230 Hsa.2925 3' UTR 1 200611 PORPHOBILINOGEN DEAMINASE (HUMAN);. [30] X64037 X64037 Hsa.2978 gene 1 H.sapiens mRNA for RNA polymerase II associated protein RAP74. [31] H04311 H04311 Hsa.28146 3' UTR 2a 149277 RAS GTPASE-ACTIVATING-LIKE PROTEIN IQGAP1 (Homo sapiens) [32] R54467 R54467 Hsa.27930 3' UTR 2a 39602 STEROID RECEPTOR TR2 (Homo sapiens) [33] T56475 T56475 Hsa.3967 3' UTR 2a 72983 CUT9 PROTEIN (Schizosaccharomyces pombe) [34] H27277 H27277 Hsa.35968 3' UTR 2a 158402 HOMEOBOX PROTEIN HOX-A4 (Homo sapiens) [35] R70253 R70253 Hsa.32319 3' UTR 2a 155165 GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR RALGDSA (Mus musculus) [36] T79473 T79473 Hsa.2956 3' UTR 1 114097 PROTEIN PHOSPHATASE PP-X (HUMAN);. [37] U21049 U21049 Hsa.41187 gene 1 "Human DD96 mRNA, complete cds. " [38] X82166 X82166 Hsa.401 gene 1 H.sapiens mRNA for cystathionine-beta-synthase. ------------------------------------------------------------ clusterID = 34 # of genes = 11 -------------------------- [1] R43976 R43976 Hsa.24279 3' UTR 2a 33626 COUP TRANSCRIPTION FACTOR (Homo sapiens) [2] R41866 R41866 Hsa.23249 3' UTR 2a 31854 CD81 ANTIGEN (Mus musculus) [3] X75304(1) X75304 Hsa.2530 gene 1 H.sapiens giantin mRNA. [4] R71251(1) R71251 Hsa.20609 3' UTR 2a 143073 TYPE-1A ANGIOTENSIN II RECEPTOR (Homo sapiens) [5] R71251(2) R71251 Hsa.20609 3' UTR 2a 143073 TYPE-1A ANGIOTENSIN II RECEPTOR (Homo sapiens) [6] R39599 R39599 Hsa.27300 3' UTR 2a 137625 "RYANODINE RECEPTOR, SKELETAL MUSCLE (Oryctolagus cuniculus) " [7] R45529 R45529 Hsa.25536 3' UTR 2a 35344 POTASSIUM CHANNEL PROTEIN KV2.1 (Rattus norvegicus) [8] M83221 M83221 Hsa.862 gene 1 TRANSCRIPTION FACTOR RELB (HUMAN);. [9] H05695 H05695 Hsa.25294 3' UTR 2a 43903 POSSIBLE GUSTATORY RECEPTOR CLONE PTE38 (Rattus norvegicus) [10] R36644 R36644 Hsa.25830 3' UTR 2a 136908 ACTIVIN RECEPTOR TYPE IIB PRECURSOR (Xenopus laevis) [11] Y00661 Y00661 Hsa.2602 gene 1 Human bcr mRNA (break point cluster gene). ------------------------------------------------------------ clusterID = 35 # of genes = 5 -------------------------- [1] R75843 R75843 Hsa.3803 3' UTR 2a 143567 TRANSLATIONAL INITIATION FACTOR 2 GAMMA SUBUNIT (Homo sapiens) [2] X70040 X70040 Hsa.2996 gene 1 H.sapiens RON mRNA for tyrosine kinase. [3] X54101 X54101 Hsa.2897 gene 1 NKG5 PROTEIN PRECURSOR (HUMAN);. [4] R85479 R85479 Hsa.36528 3' UTR 2a 180094 TRANSCRIPTIONAL ACTIVATOR FE65 (Rattus norvegicus) [5] H23098 H23098 Hsa.29817 3' UTR 2a 52062 CHL1 PROTEIN (Saccharomyces cerevisiae) ------------------------------------------------------------ clusterID = 36 # of genes = 23 -------------------------- [1] X79066 X79066 Hsa.7280 gene 1 H. sapiens ERF-1 mRNA 5' end. [2] H88360(2) H88360 Hsa.45604 3' UTR 2a 252849 "GUANINE NUCLEOTIDE-BINDING PROTEIN G(OLF), ALPHA SUBUNIT (Rattus norvegicus) " [3] L28010 L28010 Hsa.812 gene 1 "Homo sapiens HnRNP F protein mRNA, complete cds. " [4] T50334(1) T50334 Hsa.9817 3' UTR 2a 72201 14-3-3-LIKE PROTEIN GF14 OMEGA (Arabidopsis thaliana) [5] H20505 H20505 Hsa.4954 3' UTR 2a 173124 RAC-ALPHA SERINE/THREONINE KINASE (Homo sapiens) [6] R62425 R62425 Hsa.9277 3' UTR 2a 36222 ALBUMIN B-32 PROTEIN (Zea mays) [7] T50334(2) T50334 Hsa.9817 3' UTR 2a 72201 14-3-3-LIKE PROTEIN GF14 OMEGA (Arabidopsis thaliana) [8] U37012 U37012 Hsa.41315 gene 1 "Human cleavage and polyadenylation specificity factor mRNA, complete cds. " [9] D14520 D14520 Hsa.81 gene 1 "Human mRNA for GC-Box binding protein BTEB2, complete cds. " [10] U37408 U37408 Hsa.41347 gene 1 "Human CtBP mRNA, complete cds. " [11] M27903 M27903 Hsa.995 gene 1 "Human pim-1 proto-oncogene gene, complete cds. " [12] L39874 L39874 Hsa.714 gene 1 "Homo sapiens deoxycytidylate deaminase gene, complete cds. " [13] M74491 M74491 Hsa.591 gene 1 "Human ADP-ribosylation factor 3 mRNA, complete cds. " [14] M57567 M57567 Hsa.592 gene 1 "Human ADP-ribosylation factor (hARF5) mRNA, complete cds. " [15] R59097 R59097 Hsa.5633 3' UTR 2a 42048 TYROSINE-PROTEIN KINASE RECEPTOR TIE-1 PRECURSOR (Mus musculus) [16] U07695(1) U07695 Hsa.465 gene 1 "Human tyrosine kinase (HTK) mRNA, complete cds. " [17] U07695(2) U07695 Hsa.465 gene 1 "Human tyrosine kinase (HTK) mRNA, complete cds. " [18] H69872 H69872 Hsa.43155 3' UTR 2a 212391 "PROTEIN KINASE C, DELTA TYPE (Homo sapiens) " [19] H81864 H81864 Hsa.44686 3' UTR 2a 249332 CELL DIVISION CONTROL PROTEIN 2 HOMOLOG (Plasmodium falciparum) [20] U07695(3) U07695 Hsa.465 gene 1 "Human tyrosine kinase (HTK) mRNA, complete cds. " [21] H11054 H11054 Hsa.459 3' UTR 1 47306 "PROTEIN KINASE C, DELTA TYPE (HUMAN);. " [22] R26146 R26146 Hsa.946 3' UTR 1 133109 NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT (HUMAN);. [23] L11706 L11706 Hsa.41260 gene 1 "Human hormone-sensitive lipase (LIPE) gene, complete cds. " ------------------------------------------------------------ clusterID = 37 # of genes = 26 -------------------------- [1] T88723 T88723 Hsa.1139 3' UTR 1 109876 UBIQUITIN (HUMAN);. [2] X00700 X00700 Hsa.1829 gene 1 Human mRNA fragment for class II histocompatibility antigen beta-chain (pII-beta-4). [3] T57882(2) T57882 Hsa.11096 3' UTR 2a 71636 "MYOSIN HEAVY CHAIN, NONMUSCLE TYPE A (Homo sapiens) " [4] T61627 T61627 Hsa.11780 3' UTR 2a 78107 APOLIPOPROTEIN E PRECURSOR (Oryctolagus cuniculus) [5] M90684 M90684 Hsa.1830 gene 1 "Human lymphocyte antigen (HLA-G2.1) mRNA, complete cds. " [6] H65182 H65182 Hsa.12209 3' UTR 2a 238736 SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 1-ALPHA/BETA (Homo sapiens) [7] J04182 J04182 Hsa.1793 gene 1 LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN 1 PRECURSOR (HUMAN);. [8] J04794 J04794 Hsa.1244 gene 1 "Human aldehyde reductase mRNA, complete cds. " [9] T89422 T89422 Hsa.17822 3' UTR 2a 116291 CELL DIVISION CONTROL PROTEIN 3 (Saccharomyces cerevisiae) [10] M97370 M97370 Hsa.1630 gene 1 "Human adenosine receptor (A2) gene, complete cds. " [11] H71150 H71150 Hsa.1258 3' UTR 1 214726 APOLIPOPROTEIN C-III PRECURSOR (HUMAN);. [12] D13138 D13138 Hsa.109 gene 1 Human mRNA for dipeptidase. [13] T67921 T67921 Hsa.12754 3' UTR 2a 81975 ASIALOGLYCOPROTEIN RECEPTOR R2/3 (Rattus norvegicus) [14] M22490 M22490 Hsa.1284 gene 1 Human bone morphogenetic protein-2B (BMP-2B) mRNA. [15] M73481 M73481 Hsa.1489 gene 1 "Human gastrin releasing peptide receptor (GRPR) mRNA, complete cds. " [16] M36341 M36341 Hsa.1537 gene 1 "Human ADP-ribosylation factor 4 (ARF4) mRNA, complete cds. " [17] X93499 X93499 Hsa.18513 gene 1 H.sapiens mRNA for RAB7 protein. [18] M63959 M63959 Hsa.1216 gene 1 "Human alpha-2-macroglobulin receptor-associated protein mRNA, complete cds. " [19] M38258 M38258 Hsa.1512 gene 1 RETINOIC ACID RECEPTOR GAMMA-1 (HUMAN);. [20] U18300 U18300 Hsa.14453 gene 1 "Human damage-specific DNA binding protein p48 subunit (DDB2) mRNA, complete cds. " [21] T62568 T62568 Hsa.11932 3' UTR 2a 79742 LYMPHOTOXIN-ALPHA/BETA RECEPTOR PRECURSOR (Homo sapiens) [22] M28650(2) M28650 Hsa.1414 gene 1 "Human excision repair protein (ERCC-1) mRNA, complete cds. cDNA clone pcDE. " [23] J02906 J02906 Hsa.1375 gene 1 "Human cytochrome P450IIF1 protein (CYP2F) mRNA, complete cds. " [24] U08198 U08198 Hsa.1294 gene 1 "Human complement C8 gamma subunit precursor (C8G) gene, complete cds. " [25] T53360 T53360 Hsa.10314 3' UTR 2a 68745 BRAIN CALCIUM CHANNEL BI-2 PROTEIN (Oryctolagus cuniculus) [26] T64012 T64012 Hsa.12241 3' UTR 2a 79817 "ACETYLCHOLINE RECEPTOR PROTEIN, DELTA CHAIN PRECURSOR (Xenopus laevis) " ------------------------------------------------------------ clusterID = 38 # of genes = 30 -------------------------- [1] M63509 M63509 Hsa.1768 gene 1 "Human glutathione transferase M2 (GSTM2) mRNA, complete cds. " [2] D16431 D16431 Hsa.1132 gene 1 "Human mRNA for hepatoma-derived growth factor, complete cds. " [3] H28711 H28711 Hsa.1106 3' UTR 1 49666 "Human tetracycline transporter-like protein mRNA, complete cds. " [4] L35249 L35249 Hsa.1715 gene 1 "VACUOLAR ATP SYNTHASE SUBUNIT B, BRAIN ISOFORM (HUMAN);. " [5] T47584 T47584 Hsa.154 3' UTR 1 71261 60S RIBOSOMAL PROTEIN L22 (HUMAN). [6] R39681(2) R39681 Hsa.14360 3' UTR 2a 24083 EUKARYOTIC INITIATION FACTOR 4 GAMMA (Homo sapiens) [7] H24030 H24030 Hsa.1726 3' UTR 1 51695 S40237 CHAPERONIN - ;. [8] R61249 R61249 Hsa.14884 3' UTR 2a 42966 "DYNACTIN, 150 KD ISOFORM (Rattus norvegicus) " [9] T83644 T83644 Hsa.16505 3' UTR 2a 113270 "CALPAIN I, LARGE (Oryctolagus cuniculus) " [10] H73758 H73758 Hsa.1676 3' UTR 1 214923 PSORIASIS-ASSOCIATED FATTY ACID BINDING PROTEIN HOMOLOG (HUMAN);. [11] H87473 H87473 Hsa.1177 3' UTR 1 252519 "Human mRNA for proteasome subunit X, complete cds. " [12] U00968 U00968 Hsa.166 gene 1 STEROL REGULATORY ELEMENT BINDING PROTEIN 1 (HUMAN);. [13] D38549 D38549 Hsa.1192 gene 1 "Human mRNA (KIAA0068) for ORF, partial cds. " [14] L10717 L10717 Hsa.114 gene 1 TYROSINE-PROTEIN KINASE LYK (HUMAN);contains Alu repetitive element;. [15] M86737 M86737 Hsa.1714 gene 1 "Human high mobility group box (SSRP1) mRNA, complete cds. " [16] L24038 L24038 Hsa.13522 gene 1 "Human murine sarcoma 3611 viral (v-raf) oncogene homolog 1 (ARAF1) gene, exons 1-16. " [17] U09587 U09587 Hsa.1588 gene 1 "Human glycyl-tRNA synthetase mRNA, complete cds. " [18] D42053 D42053 Hsa.1580 gene 1 "Human mRNA (KIAA0091) for ORF (subtilisin-related), complete cds. " [19] T71612 T71612 Hsa.14976 3' UTR 2a 110328 "PHOSPHOGLYCERATE MUTASE, BRAIN FORM (Rattus norvegicus) " [20] J03143 J03143 Hsa.1530 gene 1 INTERFERON-GAMMA RECEPTOR ALPHA CHAIN PRECURSOR (HUMAN);. [21] T71001 T71001 Hsa.1171 3' UTR 1 84082 PROLIFERATION-ASSOCIATED PROTEIN PAG (HUMAN);. [22] D26600 D26600 Hsa.1403 gene 1 "Human mRNA for proteasome subunit HsN3, complete cds. " [23] M65209 M65209 Hsa.1705 gene 1 "Human transcription factor 4, Helix-loop-helix transcription factor 4 (HTF4/TCF12) mRNA, 3' end. " [24] T98555 T98555 Hsa.17564 3' UTR 2a 123113 DNA-DIRECTED RNA POLYMERASES I AND III 16 KD POLYPEPTIDE (Saccharomyces cerevisiae) [25] M77829 M77829 Hsa.1655 gene 1 "Human channel-like integral membrane protein (CHIP28) mRNA, complete cds. " [26] H05899 H05899 Hsa.1045 3' UTR 1 43338 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS C1/C2 (HUMAN);. [27] T94993 T94993 Hsa.18790 3' UTR 2a 119988 FIBROBLAST GROWTH FACTOR RECEPTOR 2 PRECURSOR (Homo sapiens) [28] X72632 X72632 Hsa.1398 gene 1 H.sapiens mRNA encoding Rev-ErbAalpha (internal fragment). [29] R09502 R09502 Hsa.1780 3' UTR 1 127707 LAMININ BETA-1 CHAIN PRECURSOR (HUMAN);. [30] U10886 U10886 Hsa.1185 gene 1 "Human density enhanced phosphatase-1 mRNA, complete cds. " ------------------------------------------------------------ clusterID = 39 # of genes = 21 -------------------------- [1] T52015 T52015 Hsa.2221 3' UTR 1 72642 ELONGATION FACTOR 1-GAMMA (HUMAN). [2] X57346 X57346 Hsa.2542 gene 1 H.sapiens mRNA for HS1 protein. [3] R50158 R50158 Hsa.27685 3' UTR 2a 153229 MITOCHONDRIAL LON PROTEASE HOMOLOG PRECURSOR (Homo sapiens) [4] T72879 T72879 Hsa.1978 3' UTR 1 84299 60S RIBOSOMAL PROTEIN L7A (HUMAN);. [5] H48072 H48072 Hsa.2655 3' UTR 1 193348 CYTOCHROME C OXIDASE POLYPEPTIDE VIA-LIVER (HUMAN);. [6] R24425 R24425 Hsa.25451 3' UTR 2a 131639 "GUANINE NUCLEOTIDE-BINDING PROTEIN G(OLF), ALPHA SUBUNIT (Rattus norvegicus) " [7] D63874 D63874 Hsa.2773 gene 1 Human mRNA for HMG-1. [8] X15822 X15822 Hsa.2360 gene 1 Human COX VIIa-L mRNA for liver-specific cytochrome c oxidase (EC 1.9.3.1.). [9] X53743 X53743 Hsa.2710 gene 1 H.sapiens mRNA for fibulin-1 C. [10] X61123 X61123 Hsa.2613 gene 1 Human BTG1 mRNA. [11] T96942 T96942 Hsa.194 3' UTR 1 121153 "Human mRNA for mitochondrial short-chain enoyl-CoA hydratase, complete cds. " [12] T70058 T70058 Hsa.2251 3' UTR 1 80950 P07157 ELONGATION FACTOR TU ;. [13] T54341 T54341 Hsa.2440 3' UTR 1 69270 P25886 60S RIBOSOMAL PROTEIN L29. [14] R42291 R42291 Hsa.24110 3' UTR 2a 30795 DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 2 (Homo sapiens) [15] H40560 H40560 Hsa.2588 3' UTR 1 175410 THIOREDOXIN (HUMAN);. [16] R53769 R53769 Hsa.2612 3' UTR 1 138069 TRANSCRIPTION FACTOR BTF3 (HUMAN);. [17] H20426 H20426 Hsa.27686 3' UTR 2a 172457 NUCLEOSIDE DIPHOSPHATE KINASE (Ginglymostoma cirratum) [18] X57347 X57347 Hsa.2543 gene 1 H.sapiens mRNA for HS1 protein. [19] R09479 R09479 Hsa.21369 3' UTR 2a 127656 "DNA-DIRECTED RNA POLYMERASES I, II, AND III 8.3 KD POLYPEPTIDE (Saccharomyces cerevisiae) " [20] J03824 J03824 Hsa.1973 gene 1 UROPORPHYRINOGEN-III SYNTHASE (HUMAN);. [21] T79616 T79616 Hsa.1957 3' UTR 1 113698 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING (HUMAN);. ------------------------------------------------------------ clusterID = 40 # of genes = 14 -------------------------- [1] T56940 T56940 Hsa.538 3' UTR 1 68306 P24050 40S RIBOSOMAL PROTEIN. [2] L10284 L10284 Hsa.544 gene 1 "Homo sapiens integral membrane protein, calnexin, (IP90) mRNA, complete cds. " [3] U11292 U11292 Hsa.479 gene 1 "Human Ki nuclear autoantigen mRNA, complete cds. " [4] R15447 R15447 Hsa.8010 3' UTR 2a 53083 CALNEXIN PRECURSOR (Homo sapiens) [5] R83354 R83354 Hsa.4907 3' UTR 2a 186615 GDP DISSOCIATION INHIBITOR FOR RHO PROTEIN (Bos taurus) [6] T49703 T49703 Hsa.9691 3' UTR 2a 67944 60S ACIDIC RIBOSOMAL PROTEIN P1 (Polyorchis penicillatus) [7] H87344 H87344 Hsa.45499 3' UTR 2a 252396 SERUM ALBUMIN PRECURSOR (Homo sapiens) [8] H17969 H17969 Hsa.896 3' UTR 1 50308 H.sapiens mRNA for 90K product. [9] H87465 H87465 Hsa.6048 3' UTR 2a 252514 PRE-MRNA SPLICING FACTOR SRP75 (Homo sapiens) [10] M23254 M23254 Hsa.646 gene 1 "Human Ca2-activated neutral protease large subunit (CANP) mRNA, complete cds. " [11] H70609 H70609 Hsa.42738 3' UTR 2a 234133 CA2+/CALMODULIN-RESPONSIVE ADENYLATE CYCLASE (Drosophila melanogaster) [12] R65697 R65697 Hsa.31801 3' UTR 2a 139435 ATP SYNTHASE A CHAIN (Trypanosoma brucei brucei) [13] H73908 H73908 Hsa.43894 3' UTR 2a 214839 METALLOTHIONEIN-IA (Bos taurus) [14] H64526 H64526 Hsa.43284 3' UTR 2a 238918 VIRION INFECTIVITY FACTOR (Visna lentivirus) ------------------------------------------------------------ clusterID = 41 # of genes = 12 -------------------------- [1] M19283 M19283 Hsa.1222 gene 1 "Human cytoskeletal gamma-actin gene, complete cds. " [2] T69425 T69425 Hsa.1215 3' UTR 1 82963 ALPHA-2-MACROGLOBULIN PRECURSOR (HUMAN);. [3] T51849 T51849 Hsa.10047 3' UTR 2a 75009 TYROSINE-PROTEIN KINASE RECEPTOR ELK PRECURSOR (Rattus norvegicus) [4] T54360 T54360 Hsa.1698 3' UTR 1 69068 GRANULINS PRECURSOR (HUMAN). [5] X17273 X17273 Hsa.1712 gene 1 Human HLA G (HLA 6.0) mRNA for non classical class I transplantation antigen. [6] J03004 J03004 Hsa.1467 gene 1 "Human guanine nucleotide-binding regulatory protein (G) alpha-inhibitory-subunit mRNA, complete cds. " [7] T83361 T83361 Hsa.16443 3' UTR 2a 116665 GAMMA INTERFERON INDUCED MONOKINE PRECURSOR (Homo sapiens) [8] T89649 T89649 Hsa.17776 3' UTR 2a 117479 "ELONGATION FACTOR 1-ALPHA, SOMATIC FORM (Xenopus laevis) " [9] R54097 R54097 Hsa.1410 3' UTR 1 41511 TRANSLATIONAL INITIATION FACTOR 2 BETA SUBUNIT (HUMAN);. [10] T58731 T58731 Hsa.11240 3' UTR 2a 77478 KETOHEXOKINASE (Rattus norvegicus) [11] T86444 T86444 Hsa.17426 3' UTR 2a 115255 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [12] H66786 H66786 Hsa.16092 3' UTR 2a 212039 ESTROGEN SULFOTRANSFERASE (Bos taurus) ------------------------------------------------------------ clusterID = 42 # of genes = 1 -------------------------- [1] M27190 M27190 Hsa.1039 gene 1 "Homo sapiens secretory pancreatic stone protein (PSP-S) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 43 # of genes = 22 -------------------------- [1] Z22572 Z22572 Hsa.580 gene 1 H.sapiens CDEI binding protein mRNA. [2] T70063 T70063 Hsa.8606 3' UTR 2a 80947 EUKARYOTIC INITIATION FACTOR 4 GAMMA (Oryctolagus cuniculus) [3] R72300 R72300 Hsa.9372 3' UTR 2a 155939 INITIATION FACTOR 5A (Homo sapiens) [4] H05070 H05070 Hsa.4234 3' UTR 2a 43401 DNA-BINDING PROTEIN 65 (Bacteriophage t4) [5] T47562(2) T47562 Hsa.9285 3' UTR 2a 71242 ER LUMEN PROTEIN RETAINING RECEPTOR 1 (Homo sapiens) [6] H11650 H11650 Hsa.7247 3' UTR 2a 48176 ADP-RIBOSYLATION FACTOR 4 (Homo sapiens) [7] R46753 R46753 Hsa.8219 3' UTR 2a 152524 CYCLIN-DEPENDENT KINASE INHIBITOR 1 (Homo sapiens) [8] T50077 T50077 Hsa.9761 3' UTR 2a 70206 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [9] M31627 M31627 Hsa.834 gene 1 X BOX BINDING PROTEIN-1 (HUMAN);. [10] H82719 H82719 Hsa.5142 3' UTR 2a 249109 BETA-ADAPTIN (Homo sapiens) [11] H83703 H83703 Hsa.44876 3' UTR 2a 249247 NUCLEOSIDE DIPHOSPHATE KINASE A (Homo sapiens) [12] T47562(3) T47562 Hsa.9285 3' UTR 2a 71242 ER LUMEN PROTEIN RETAINING RECEPTOR 1 (Homo sapiens) [13] Z49269(1) Z49269 Hsa.41280 gene 1 H.sapiens gene for chemokine HCC-1. [14] Z49269(2) Z49269 Hsa.41280 gene 1 H.sapiens gene for chemokine HCC-1. [15] U07158 U07158 Hsa.487 gene 1 "Human syntaxin mRNA, complete cds. " [16] H89688 H89688 Hsa.45754 3' UTR 2a 250489 GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 4 (Saccharomyces cerevisiae) [17] M29277 M29277 Hsa.471 gene 1 "Human isolate JuSo MUC18 glycoprotein mRNA (3' variant), complete cds. " [18] M96824 M96824 Hsa.959 gene 1 NUCLEOBINDIN PRECURSOR (HUMAN);. [19] T40568 T40568 Hsa.8837 3' UTR 2a 60605 MSS4 PROTEIN (Saccharomyces cerevisiae) [20] D11086 D11086 Hsa.84 gene 1 Human mRNA for interleukin 2 receptor gamma chain. [21] L24203 L24203 Hsa.717 gene 1 "Homo sapiens ataxia-telangiectasia group D-associated protein mRNA, complete cds. " [22] D11466 D11466 Hsa.51 gene 1 N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC (HUMAN);. ------------------------------------------------------------ clusterID = 44 # of genes = 6 -------------------------- [1] T51558 T51558 Hsa.1331 3' UTR 1 72223 PROCOLLAGEN ALPHA 1(I) CHAIN PRECURSOR (HUMAN). [2] T54767 T54767 Hsa.10522 3' UTR 2a 73802 SPARC PRECURSOR (Homo sapiens) [3] D13665 D13665 Hsa.108 gene 1 Human mRNA for osteoblast specific factor 2 (OSF-2p1). [4] X06700 X06700 Hsa.2337 gene 1 Human mRNA 3' region for pro-alpha1(III) collagen. [5] T78323 T78323 Hsa.1346 3' UTR 1 114526 PROCOLLAGEN ALPHA 1(IV) CHAIN PRECURSOR (HUMAN);. [6] L12350 L12350 Hsa.205 gene 1 THROMBOSPONDIN 2 PRECURSOR (HUMAN);. ------------------------------------------------------------ clusterID = 45 # of genes = 3 -------------------------- [1] M34175(1) M34175 Hsa.612 gene 1 "Human beta adaptin mRNA, complete cds. " [2] M34175(2) M34175 Hsa.612 gene 1 "Human beta adaptin mRNA, complete cds. " [3] M34175(3) M34175 Hsa.612 gene 1 "Human beta adaptin mRNA, complete cds. " ------------------------------------------------------------ clusterID = 46 # of genes = 6 -------------------------- [1] X68277 X68277 Hsa.2646 gene 1 H.sapiens CL 100 mRNA for protein tyrosine phosphatase. [2] X52541 X52541 Hsa.742 gene 1 Human mRNA for early growth response protein 1 (hEGR1). [3] T74896 T74896 Hsa.3215 3' UTR 1 84893 SERUM AMYLOID A PROTEIN PRECURSOR (HUMAN);. [4] R67358 R67358 Hsa.5211 3' UTR 2a 141200 MAP KINASE PHOSPHATASE-1 (Homo sapiens) [5] R70479 R70479 Hsa.32345 3' UTR 2a 141806 PUTATIVE DNA BINDING PROTEIN A20 (Homo sapiens) [6] M26683 M26683 Hsa.341 gene 1 Human interferon gamma treatment inducible mRNA. ------------------------------------------------------------ clusterID = 47 # of genes = 10 -------------------------- [1] T70046 T70046 Hsa.10067 3' UTR 2a 80923 ENDOTHELIAL ACTIN-BINDING PROTEIN (Homo sapiens) [2] T54670 T54670 Hsa.10516 3' UTR 1 73777 "P13621 ATP SYNTHASE OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN PRECURSOR, MITOCHONDRIAL. " [3] U02493(2) U02493 Hsa.168 gene 1 "Human 54 kDa protein mRNA, complete cds. " [4] M23419(2) M23419 Hsa.1670 gene 1 INITIATION FACTOR 5A (HUMAN);contains element PTR5 repetitive element ;. [5] T71260 T71260 Hsa.14914 3' UTR 2a 110197 SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN (Canis familiaris) [6] D13639 D13639 Hsa.1315 gene 1 "Human mRNA for ORF, complete cds. " [7] X12876 X12876 Hsa.1774 gene 1 Human mRNA fragment for cytokeratin 18. [8] U37690(1) U37690 Hsa.12442 gene 1 "Human RNA polymerase II subunit (hsRPB10) mRNA, complete cds. " [9] T71049 T71049 Hsa.1352 3' UTR 1 84158 CYTOCHROME C OXIDASE POLYPEPTIDE VB PRECURSOR (HUMAN);. [10] U37690(2) U37690 Hsa.12442 gene 1 "Human RNA polymerase II subunit (hsRPB10) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 48 # of genes = 15 -------------------------- [1] R37276(1) R37276 Hsa.22614 3' UTR 2a 25988 EUKARYOTIC INITIATION FACTOR 4 GAMMA (Homo sapiens) [2] R07333 R07333 Hsa.21418 3' UTR 2a 125555 CYCLIC-AMP-DEPENDENT TRANSCRIPTION FACTOR ATF-4 (Homo sapiens) [3] D26129 D26129 Hsa.2126 gene 1 RIBONUCLEASE PANCREATIC PRECURSOR (HUMAN);contains element MER21 repetitive element ;. [4] R61332 R61332 Hsa.2086 3' UTR 1 42576 UBIQUITIN-ACTIVATING ENZYME E1 (HUMAN);. [5] M96326 M96326 Hsa.2592 gene 1 "Human azurocidin gene, complete cds. " [6] U20428 U20428 Hsa.2163 gene 1 "Human unknown protein (SNC19) mRNA, partial cds. " [7] X78706 X78706 Hsa.21596 gene 1 H.sapiens mRNA for carnitine acetyltransferase. [8] R44863 R44863 Hsa.2416 3' UTR 1 33477 H.sapiens mRNA for phenylalkylamine binding protein. [9] X04828 X04828 Hsa.2739 gene 1 Human mRNA for G(i) protein alpha-subunit (adenylate cyclase inhibiting GTP-binding protein). [10] X14767 X14767 Hsa.2725 gene 1 "Human mRNA for GABA-A receptor, beta 1 subunit. " [11] M12272 M12272 Hsa.2565 gene 1 "Homo sapiens alcohol dehydrogenase class I gamma subunit (ADH3) mRNA, complete cds. " [12] X81372 X81372 Hsa.21847 gene 1 H.sapiens mRNA for biphenyl hydrolase-related protein. [13] R15876 R15876 Hsa.23366 3' UTR 2a 53020 PRE-MRNA SPLICING FACTOR PRP9 (Saccharomyces cerevisiae) [14] R36467 R36467 Hsa.27085 3' UTR 2a 136821 TRANSFORMING GROWTH FACTOR BETA 1 PRECURSOR (Homo sapiens) [15] X67699 X67699 Hsa.2618 gene 1 H.sapiens HE5 mRNA for CDw52 antigen. ------------------------------------------------------------ clusterID = 49 # of genes = 1 -------------------------- [1] M26383 M26383 Hsa.627 gene 1 "Human monocyte-derived neutrophil-activating protein (MONAP) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 50 # of genes = 5 -------------------------- [1] X16356 X16356 Hsa.3068 gene 1 Human mRNA for transmembrane carcinoembryonic antigen BGPC (part.) (formerly TM3-CEA). [2] X83228 X83228 Hsa.393 gene 1 H.sapiens mRNA for LI-cadherin. [3] X16354 X16354 Hsa.1280 gene 1 Human mRNA for transmembrane carcinoembryonic antigen BGPa (formerly TM1-CEA). [4] M18216 M18216 Hsa.1254 gene 1 "Human nonspecific crossreacting antigen mRNA, complete cds. " [5] U14631 U14631 Hsa.1387 gene 1 "Human 11 beta-hydroxysteroid dehydrogenase type II mRNA, complete cds. " ------------------------------------------------------------ clusterID = 51 # of genes = 7 -------------------------- [1] T62633 T62633 Hsa.1825 3' UTR 1 79623 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN (HUMAN);. " [2] L20688 L20688 Hsa.1799 gene 1 "Human GDP-dissociation inhibitor protein (Ly-GDI) mRNA, complete cds. " [3] M10065 M10065 Hsa.1260 gene 1 "Human apolipoprotein E (epsilon-4 allele) gene, complete cds. " [4] M22349 M22349 Hsa.1412 gene 1 "Human neuron-specific gamma-2 enolase, complete cds. " [5] M35878 M35878 Hsa.1464 gene 1 "Human insulin-like growth factor-binding protein-3 gene, complete cds, clone HL1006d. " [6] U30498 U30498 Hsa.1574 gene 1 "Human retinoic acid-inducible E3 protein mRNA, complete cds. " [7] X16663 X16663 Hsa.15734 gene 1 Human HS1 gene for heamatopoietic lineage cell specific protein. ------------------------------------------------------------ clusterID = 52 # of genes = 15 -------------------------- [1] D13627 D13627 Hsa.2513 gene 1 "Human mRNA for ORF, complete cds. " [2] X01060 X01060 Hsa.2051 gene 1 Human mRNA for transferrin receptor. [3] L41142 L41142 Hsa.2324 gene 1 "Homo sapiens signal transducer and activator of transcription (STAT5) mRNA, complete cds. " [4] H80114 H80114 Hsa.2436 3' UTR 1 233334 "Human nuclear localization sequence receptor hSRP1alpha mRNA, complete cds. " [5] R40717(1) R40717 Hsa.23124 3' UTR 2a 28088 MAJOR SURFACE ANTIGEN PRECURSOR (Hepatitis b virus) [6] D14665 D14665 Hsa.2483 gene 1 "Human mRNA for ORF, complete cds. " [7] R56399 R56399 Hsa.25522 3' UTR 2a 40650 DEPRESSED GROWTH-RATE PROTEIN DEG1 (Saccharomyces cerevisiae) [8] R67987 R67987 Hsa.25762 3' UTR 2a 138233 PRE-MRNA SPLICING FACTOR SRP75 (Homo sapiens) [9] H11084 H11084 Hsa.24582 3' UTR 2a 47326 VASCULAR ENDOTHELIAL GROWTH FACTOR (Cavia porcellus) [10] X53799 X53799 Hsa.2210 gene 1 Human mRNA for macrophage inflammatory protein-2alpha (MIP2alpha). [11] U21914 U21914 Hsa.2300 gene 1 "Human duplicate spinal muscular atrophy mRNA, clone 5G7, partial cds. " [12] Y00062 Y00062 Hsa.2312 gene 1 "Human mRNA for T200 leukocyte common antigen (CD45, LC-A). " [13] M27826 M27826 Hsa.2458 gene 1 "Human endogenous retroviral protease mRNA, complete cds. " [14] R40717(2) R40717 Hsa.23124 3' UTR 2a 28088 MAJOR SURFACE ANTIGEN PRECURSOR (Hepatitis b virus) [15] U18062 U18062 Hsa.2137 gene 1 "Human TFIID subunit TAFII55 (TAFII55) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 53 # of genes = 7 -------------------------- [1] X12466 X12466 Hsa.1073 gene 1 Human mRNA for snRNP E protein. [2] R08183 R08183 Hsa.1205 3' UTR 1 127228 "Q04984 10 KD HEAT SHOCK PROTEIN, MITOCHONDRIAL ;. " [3] R84411 R84411 Hsa.1047 3' UTR 1 194660 SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEINS B AND B' (HUMAN);. [4] Y00711 Y00711 Hsa.2847 gene 1 L-LACTATE DEHYDROGENASE H CHAIN (HUMAN);. [5] H23544 H23544 Hsa.11673 3' UTR 2a 51894 GTP-BINDING NUCLEAR PROTEIN RAN (Homo sapiens) [6] U17899 U17899 Hsa.2250 gene 1 "Human chloride channel regulatory protein mRNA, complete cds. " [7] T57468 T57468 Hsa.1435 3' UTR 1 75165 FIBRILLARIN (HUMAN). ------------------------------------------------------------ clusterID = 54 # of genes = 2 -------------------------- [1] H88360(1) H88360 Hsa.45604 3' UTR 2a 252849 "GUANINE NUCLEOTIDE-BINDING PROTEIN G(OLF), ALPHA SUBUNIT (Rattus norvegicus) " [2] R36977 R36977 Hsa.549 3' UTR 1 26045 P03001 TRANSCRIPTION FACTOR IIIA ;. ------------------------------------------------------------ clusterID = 55 # of genes = 13 -------------------------- [1] T63499 T63499 Hsa.361 3' UTR 1 81466 "HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-26(A-10) A*2601 ALPHA (HUMAN);. " [2] Z22658 Z22658 Hsa.3063 gene 1 H.sapiens thrombin inhibitor mRNA. [3] T65580 T65580 Hsa.3272 3' UTR 1 21725 TUBULIN BETA-1 CHAIN (HUMAN);. [4] H15542 H15542 Hsa.34874 3' UTR 2a 49393 TUBULIN BETA-1 CHAIN (Brugia pahangi) [5] T50511 T50511 Hsa.3910 3' UTR 2a 77147 14-3-3-LIKE PROTEIN GF14 OMEGA (Arabidopsis thaliana) [6] D31885 D31885 Hsa.3152 gene 1 "Human mRNA (KIAA0069) for ORF (novel proetin), partial cds. " [7] Z25821 Z25821 Hsa.2858 gene 1 "H.sapiens gene for mitochondrial dodecenoyl-CoA delta-isomerase, exons 1 and 2. " [8] D16111 D16111 Hsa.347 gene 1 "Human mRNA for human homologue of rat phosphatidylethanolamine binding protein, complete cds. " [9] X12369 X12369 Hsa.3305 gene 1 "TROPOMYOSIN ALPHA CHAIN, SMOOTH MUSCLE (HUMAN);. " [10] Z35093 Z35093 Hsa.3256 gene 1 H.sapiens mRNA for SURF-1. [11] M80469 M80469 Hsa.41116 gene 1 "Human MHC class I HLA-J gene, exons 1-8 and complete cds. " [12] U29092 U29092 Hsa.36685 gene 1 "Human ubiquitin conjugating enzyme mRNA, complete cds. " [13] H17802 H17802 Hsa.3715 3' UTR 1 50251 Human liver mRNA for beta-subunit signal transducing proteins Gs/Gi (beta-G). ------------------------------------------------------------ clusterID = 56 # of genes = 11 -------------------------- [1] V00523 V00523 Hsa.914 gene 1 Human mRNA for histocompatibility antigen HLA-DR (fragment). The alpha chain. [2] X17042(1) X17042 Hsa.1939 gene 1 Human mRNA for hematopoetic proteoglycan core protein. [3] V00522 V00522 Hsa.916 gene 1 Human mRNA encoding major histocompatibility complex gene HLA-DR beta-I. [4] M27635 M27635 Hsa.41357 gene 1 "Homo sapiens MHC HLA-DRw12 allele mRNA, beta-1 chain, complete cds. " [5] X17042(2) X17042 Hsa.1939 gene 1 Human mRNA for hematopoetic proteoglycan core protein. [6] K01144 K01144 Hsa.918 gene 1 "Human major histocompatibility class II antigen gamma chain mRNA, complete cds. " [7] X03068 X03068 Hsa.912 gene 1 Human mRNA for HLA-D class II antigen DQw1.1 beta chain. [8] R98189(1) R98189 Hsa.39809 3' UTR 2a 200776 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, GAMMA CHAIN PRECURSOR (Homo sapiens) " [9] H66976 H66976 Hsa.919 3' UTR 1 212229 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DP(1) ALPHA CHAIN (HUMAN);. " [10] H26965 H26965 Hsa.35955 3' UTR 2a 182171 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, GAMMA CHAIN PRECURSOR (Homo sapiens) " [11] M13560 M13560 Hsa.5514 gene 1 "Human Ia-associated invariant gamma-chain gene, exon 8, clones lambda-y(1,2,3). " ------------------------------------------------------------ clusterID = 57 # of genes = 32 -------------------------- [1] M24398 M24398 Hsa.2063 gene 1 "Human parathymosin mRNA, complete cds. (HUMAN);contains element MER22 repetitive element ;. " [2] R37276(2) R37276 Hsa.22614 3' UTR 2a 25988 EUKARYOTIC INITIATION FACTOR 4 GAMMA (Homo sapiens) [3] R41827 R41827 Hsa.26914 3' UTR 2a 31731 SIGNAL RECOGNITION PARTICLE 72 KD PROTEIN (Canis familiaris) [4] X80026 X80026 Hsa.2598 gene 1 H.sapiens B-cam mRNA. [5] Z23115(2) Z23115 Hsa.2600 gene 1 H.sapiens bcl-xL mRNA. [6] D13634 D13634 Hsa.2505 gene 1 "Human mRNA for ORF, complete cds. " [7] H11095 H11095 Hsa.20507 3' UTR 2a 47872 UBIQUITIN (Strongylocentrotus purpuratus) [8] R77824 R77824 Hsa.25380 3' UTR 2a 145681 64 KD AUTOANTIGEN D1 (Homo sapiens) [9] M12959 M12959 Hsa.2033 gene 1 T-CELL RECEPTOR ALPHA CHAIN C REGION (HUMAN);. [10] R53036 R53036 Hsa.22251 3' UTR 2a 154339 PUTATIVE GTP-BINDING PROTEIN MOV10 (Mus musculus) [11] T40645 T40645 Hsa.2191 3' UTR 1 60737 "Human Wiskott-Aldrich syndrome (WAS) mRNA, complete cds. " [12] T98803 T98803 Hsa.19828 3' UTR 2a 122287 ER LUMEN PROTEIN RETAINING RECEPTOR 2 (Homo sapiens) [13] R54818 R54818 Hsa.2478 3' UTR 1 40360 "Human eukaryotic initiation factor 2B-epsilon mRNA, partial cds. " [14] H42477 H42477 Hsa.27592 3' UTR 2a 182692 RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 (Homo sapiens) [15] X02744 X02744 Hsa.2007 gene 1 Human mRNA for c-sis gene (clone pSM-1). [16] X07862 X07862 Hsa.2363 gene 1 Human mRNA for protamine 2. [17] R72874 R72874 Hsa.2567 3' UTR 1 157835 ANION EXCHANGE PROTEIN 2 (HUMAN);. [18] R27017 R27017 Hsa.25745 3' UTR 2a 132727 "DOPAMINE- AND CAMP-REGULATED NEURONAL PHOSPHOPROTEIN, DARPP-32 (Bos taurus) " [19] M81758 M81758 Hsa.2008 gene 1 "Homo sapiens skeletal muscle voltage-dependent sodium channel alpha subunit (SkM1) mRNA, complete cds. " [20] R40184 R40184 Hsa.22775 3' UTR 2a 27571 BETA-ADAPTIN (Homo sapiens) [21] R00285 R00285 Hsa.20164 3' UTR 2a 123267 PROTEIN KINASE CEK1 (Schizosaccharomyces pombe) [22] U34252 U34252 Hsa.2576 gene 1 "Human r-aminobutyraldehyde dehydrogenase mRNA, complete cds. " [23] X80754 X80754 Hsa.2342 gene 1 H.sapiens mRNA for GTP-binding protein. [24] H22948 H22948 Hsa.26920 3' UTR 2a 51830 CORTICOTROPIN RELEASING FACTOR RECEPTOR PRECURSOR (Mus musculus) [25] R42994 R42994 Hsa.24048 3' UTR 2a 32395 EXTRACELLULAR SIGNAL-REGULATED KINASE 2 (Rattus norvegicus) [26] H27202 H27202 Hsa.21379 3' UTR 2a 158347 ADENOVIRUS E1A ENHANCER BINDING PROTEIN (Homo sapiens) [27] R00544 R00544 Hsa.20324 3' UTR 2a 123830 AMYLOID-LIKE PROTEIN 2 PRECURSOR (Mus musculus) [28] R48936 R48936 Hsa.26698 3' UTR 2a 36885 GLYCOPROTEIN VP7 (Chicken rotavirus a) [29] R47976 R47976 Hsa.23565 3' UTR 1 153420 "Human mRNA for 26S proteasome subunit p31, complete cds. " [30] R60906 R60906 Hsa.25533 3' UTR 2a 42186 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [31] R19361 R19361 Hsa.22347 3' UTR 2a 129885 INSULIN-INDUCED GROWTH RESPONSE PROTEIN CL-6 (Rattus norvegicus) [32] X53179 X53179 Hsa.2343 gene 1 Human mRNA for neuronal nicotinic acetylcholine receptor beta-2 subunit. ------------------------------------------------------------ clusterID = 58 # of genes = 3 -------------------------- [1] H72965 H72965 Hsa.6030 3' UTR 2a 213942 26S PROTEASE REGULATORY SUBUNIT 7 (Homo sapiens) [2] T86749 T86749 Hsa.662 3' UTR 1 114310 "Human (clone PSK-J3) cyclin-dependent protein kinase mRNA, complete cds.,. " [3] X54942 X54942 Hsa.2645 gene 1 H.sapiens ckshs2 mRNA for Cks1 protein homologue. ------------------------------------------------------------ clusterID = 59 # of genes = 5 -------------------------- [1] M37984(2) M37984 Hsa.3069 gene 1 "Human slow twitch skeletal muscle/cardiac muscle troponin C gene, complete cds. " [2] X79683(1) X79683 Hsa.2841 gene 1 H.sapiens LAMB2 mRNA for beta2 laminin. [3] H15069(2) H15069 Hsa.26719 3' UTR 2a 49237 PROTEIN KINASE CLK (Mus musculus) [4] X79683(2) X79683 Hsa.2841 gene 1 H.sapiens LAMB2 mRNA for beta2 laminin. [5] D17532 D17532 Hsa.317 gene 1 "Human mRNA for RCK, complete cds. " ------------------------------------------------------------ clusterID = 60 # of genes = 9 -------------------------- [1] M23410 M23410 Hsa.2379 gene 1 PLAKOGLOBIN (HUMAN);. [2] H29170 H29170 Hsa.2589 3' UTR 1 49608 "ATP SYNTHASE B CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN);. " [3] X51521 X51521 Hsa.2094 gene 1 Human mRNA for ezrin. [4] R16077 R16077 Hsa.23285 3' UTR 2a 66419 HOMEOTIC GENE REGULATOR (Drosophila melanogaster) [5] T67905 T67905 Hsa.2156 3' UTR 1 81962 "ATP SYNTHASE GAMMA CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN);. " [6] X64364 X64364 Hsa.2120 gene 1 H.sapiens mRNA for M6 antigen. [7] L06328 L06328 Hsa.2092 gene 1 "Human voltage-dependent anion channel isoform 2 (VDAC) mRNA, complete cds. " [8] T98835 T98835 Hsa.19843 3' UTR 2a 122341 80.7 KD ALPHA TRANS-INDUCING PROTEIN (Bovine herpesvirus type 1) [9] X57348 X57348 Hsa.2551 gene 1 H.sapiens mRNA (clone 9112). ------------------------------------------------------------ clusterID = 61 # of genes = 1 -------------------------- [1] H23975(2) H23975 Hsa.35652 3' UTR 2a 159806 IG ALPHA-1 CHAIN C REGION (Gorilla gorilla gorilla) ------------------------------------------------------------ clusterID = 62 # of genes = 8 -------------------------- [1] T72175 T72175 Hsa.1737 3' UTR 1 85528 IG KAPPA CHAIN PRECURSOR V-III REGION (HUMAN);. [2] T57780(1) T57780 Hsa.31 3' UTR 1 80626 IG LAMBDA CHAIN C REGIONS (HUMAN). [3] J00231 J00231 Hsa.1534 gene 1 Human Ig gamma3 heavy chain disease OMM protein mRNA. [4] R70030 R70030 Hsa.2809 3' UTR 1 142498 IG MU CHAIN C REGION (HUMAN);. [5] T57780(2) T57780 Hsa.31 3' UTR 1 80626 IG LAMBDA CHAIN C REGIONS (HUMAN). [6] M27749 M27749 Hsa.845 gene 1 IMMUNOGLOBULIN-RELATED 14.1 PROTEIN PRECURSOR (HUMAN);. [7] M87789 M87789 Hsa.140 gene 1 IG GAMMA-1 CHAIN C REGION (HUMAN);. [8] R62549 R62549 Hsa.8214 3' UTR 2a 138906 PUTATIVE SERINE/THREONINE-PROTEIN KINASE B0464.5 IN CHROMOSOME III (Caenorhabditis elegans) ------------------------------------------------------------ clusterID = 63 # of genes = 1 -------------------------- [1] H20503 H20503 Hsa.664 3' UTR 1 173116 CELL ADHESION PROTEIN (HUMAN);. ------------------------------------------------------------ clusterID = 64 # of genes = 3 -------------------------- [1] T53868 T53868 Hsa.1385 3' UTR 1 77996 "Human peroxisomal enoyl-CoA hydratase-like protein (HPXEL) mRNA, complete cds. " [2] L20859 L20859 Hsa.1477 gene 1 "Human leukemia virus receptor 1 (GLVR1) mRNA, complete cds. " [3] R77794 R77794 Hsa.10746 3' UTR 2a 145611 15-HYDROXYPROSTAGLANDIN DEHYDROGENASE (Homo sapiens) ------------------------------------------------------------ clusterID = 65 # of genes = 9 -------------------------- [1] M57710 M57710 Hsa.624 gene 1 "Human IgE-binding protein (epsilon-BP) mRNA, complete cds. " [2] M62994 M62994 Hsa.568 gene 1 "Homo sapiens thyroid autoantigen (truncated actin-binding protein) mRNA, complete cds. " [3] H64489 H64489 Hsa.43279 3' UTR 2a 238846 LEUKOCYTE ANTIGEN CD37 (Homo sapiens) [4] K02566(1) K02566 Hsa.561 gene 1 "KININOGEN, LMW PRECURSOR (HUMAN);. " [5] K02566(2) K02566 Hsa.561 gene 1 "KININOGEN, LMW PRECURSOR (HUMAN);. " [6] T59162 T59162 Hsa.8374 3' UTR 2a 74635 SELENIUM-BINDING PROTEIN (Mus musculus) [7] K02566(3) K02566 Hsa.561 gene 1 "KININOGEN, LMW PRECURSOR (HUMAN);. " [8] M80815 M80815 Hsa.579 gene 1 "H.sapiens a-L-fucosidase gene, exon 7 and 8, and complete cds. " [9] D16294 D16294 Hsa.421 gene 1 "Human mRNA for mitochondrial 3-oxoacyl-CoA thiolase, complete cds. " ------------------------------------------------------------ clusterID = 66 # of genes = 20 -------------------------- [1] X82456 X82456 Hsa.3440 gene 1 H.sapiens MLN50 mRNA. [2] T46888 T46888 Hsa.3031 3' UTR 1 78863 "SUPEROXIDE DISMUTASE ,. " [3] H38185 H38185 Hsa.29228 3' UTR 2a 191586 ACYL-COA-BINDING PROTEIN (Homo sapiens) [4] T48386 T48386 Hsa.2902 3' UTR 1 74212 P68 PROTEIN (HUMAN). [5] U27143 U27143 Hsa.3207 gene 1 "Human protein kinase C inhibitor-I cDNA, complete cds. " [6] T78489 T78489 Hsa.2870 3' UTR 1 113437 "MYOSIN REGULATORY LIGHT CHAIN 2, NONSARCOMERIC (HUMAN);. " [7] X72727 X72727 Hsa.3088 gene 1 H.sapiens tunp mRNA for transformation upregulated nuclear protein. [8] D14043 D14043 Hsa.39 gene 1 PUTATIVE MUCIN CORE PROTEIN PRECURSOR 24 (HUMAN);contains L1 repetitive element ;. [9] M60484 M60484 Hsa.2951 gene 1 "Human protein phosphatase 2A catalytic subunit-beta gene, complete cds. " [10] M60706 M60706 Hsa.318 gene 1 "Homo sapiens type I DNA topoisomerase gene, exon 21. " [11] U39360 U39360 Hsa.3517 gene 1 "Human DNA-binding protein (CROC-1A) mRNA, complete cds. " [12] H89983 H89983 Hsa.3820 3' UTR 2a 250531 METALLOPAN-STIMULIN 1 (Homo sapiens) [13] X84700 X84700 Hsa.3164 gene 1 H.sapiens mRNA for leucocyte antigen CD97. [14] X76228 X76228 Hsa.3099 gene 1 H.sapiens mRNA for vacuolar H+ ATPase E subunit. [15] H88250 H88250 Hsa.33368 3' UTR 2a 252792 TRANSFORMER-2 SEX-DETERMINING PROTEIN (Drosophila melanogaster) [16] H09719 H09719 Hsa.34431 3' UTR 2a 45452 TUBULIN ALPHA-6 CHAIN (Mus musculus) [17] L26050(1) L26050 Hsa.3127 gene 1 "Human mitochondrial 2,4-dienoyl-CoA reductase mRNA, complete cds. " [18] L19437(2) L19437 Hsa.305 gene 1 TRANSALDOLASE (HUMAN);contains Alu repetitive element;contains PTR5 repetitive element ;. [19] L07648 L07648 Hsa.404 gene 1 "Human MXI1 mRNA, complete cds. " [20] X07767 X07767 Hsa.2939 gene 1 Human mRNA for cAMP-dependent protein kinase catalytic subunit type alpha (EC 2.7.1.37). ------------------------------------------------------------ clusterID = 67 # of genes = 1 -------------------------- [1] T55117 T55117 Hsa.1212 3' UTR 1 73917 ALPHA-1-ANTITRYPSIN PRECURSOR (HUMAN). ------------------------------------------------------------ clusterID = 68 # of genes = 1 -------------------------- [1] R98410 R98410 Hsa.3082 3' UTR 1 200657 S25641 HYPOTHETICAL PROTEIN - ;. ------------------------------------------------------------ clusterID = 69 # of genes = 12 -------------------------- [1] M16827 M16827 Hsa.1219 gene 1 "Human medium-chain acyl-CoA dehydrogenase (ACADM) mRNA, complete cds. " [2] R42244 R42244 Hsa.10706 3' UTR 1 30543 ANTIGEN PEPTIDE TRANSPORTER 1 (HUMAN);. [3] M75883 M75883 Hsa.179 gene 1 "Human sterol carrier protein X/sterol carrier protein 2 mRNA, complete cds. " [4] X69141 X69141 Hsa.1088 gene 1 H.sapiens mRNA for squalene synthase. [5] M29065 M29065 Hsa.1043 gene 1 Human hnRNP A2 protein mRNA. [6] T65758 T65758 Hsa.1030 3' UTR 1 80374 "PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT, SOMATIC (HUMAN);. " [7] T60437 T60437 Hsa.11572 3' UTR 2a 78555 MITOCHONDRIAL PROCESSING PEPTIDASE BETA SUBUNIT PRECURSOR (Neurospora crassa) [8] M38690 M38690 Hsa.1253 gene 1 "Human CD9 antigen mRNA, complete cds. " [9] D14663 D14663 Hsa.121 gene 1 "Human mRNA for ORF, complete cds. " [10] T83368 T83368 Hsa.10664 3' UTR 2a 116679 MEMBRANE COFACTOR PROTEIN PRECURSOR (Homo sapiens) [11] M15841 M15841 Hsa.1143 gene 1 U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B' (HUMAN);. [12] D38551 D38551 Hsa.1198 gene 1 "Human mRNA (KIAA0078) for ORF (s.pombe rad21 gene product-related), complete cds. " ------------------------------------------------------------ clusterID = 70 # of genes = 10 -------------------------- [1] H80975 H80975 Hsa.628 3' UTR 1 240954 PLASMA PROTEASE C1 INHIBITOR PRECURSOR (HUMAN);. [2] U01691 U01691 Hsa.8 gene 1 "Human annexin V (ANX5) gene, exon 13 and 3'-untranslated region. " [3] R73660 R73660 Hsa.847 3' UTR 1 143143 GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR (HUMAN);. [4] T51261 T51261 Hsa.9972 3' UTR 2a 70133 GLIA DERIVED NEXIN PRECURSOR (Mus musculus) [5] T47069 T47069 Hsa.9153 3' UTR 2a 71011 ATP SYNTHASE A CHAIN (Trypanosoma brucei brucei) [6] M69066 M69066 Hsa.925 gene 1 MOESIN (HUMAN);contains PTR5 repetitive element ;. [7] R32804 R32804 Hsa.8007 3' UTR 1 135146 "GLUCOSE TRANSPORTER TYPE 3, BRAIN (HUMAN);contains Alu repetitive element;. " [8] M28882 M28882 Hsa.477 gene 1 "Human MUC18 glycoprotein mRNA, complete cds. " [9] T67406 T67406 Hsa.9103 3' UTR 2a 81780 COMPLEMENT C4 PRECURSOR (Homo sapiens) [10] M33210 M33210 Hsa.984 gene 1 "Human colony stimulating factor 1 receptor (CSF1R) gene, exon 5. " ------------------------------------------------------------ clusterID = 71 # of genes = 9 -------------------------- [1] R52271 R52271 Hsa.21660 3' UTR 2a 154410 OUTER MEMBRANE USHER PROTEIN PAPC PRECURSOR (Escherichia coli) [2] R53936 R53936 Hsa.19232 3' UTR 2a 39921 PROTEIN PHOSPHATASE 2C HOMOLOG 2 (Schizosaccharomyces pombe) [3] H09599 H09599 Hsa.34416 3' UTR 2a 46382 MITOCHONDRIAL IMPORT RECEPTOR MOM38 (Neurospora crassa) [4] R10620 R10620 Hsa.22167 3' UTR 2a 128901 TYROSINE-PROTEIN KINASE CSK (Homo sapiens) [5] Y00281 Y00281 Hsa.2317 gene 1 RIBOPHORIN I PRECURSOR (HUMAN);contains element TAR1 repetitive element ;. [6] H29483 H29483 Hsa.2345 3' UTR 1 49967 INTERCELLULAR ADHESION MOLECULE-2 PRECURSOR (HUMAN);. [7] T79161 T79161 Hsa.2469 3' UTR 1 113567 "Human YL-1 mRNA for YL-1 protein (nuclear protein with DNA-binding ability), complete cds. " [8] M93651 M93651 Hsa.1994 gene 1 SET PROTEIN (HUMAN);contains Alu repetitive element;. [9] D13243 D13243 Hsa.212 gene 1 "Human pyruvate kinase-L gene, exon 12. " ------------------------------------------------------------ clusterID = 72 # of genes = 16 -------------------------- [1] R98959 R98959 Hsa.27491 3' UTR 1 200858 "Homo sapiens very long chain acyl-CoA dehydrogenase gene, exons 1-20, complete cds. " [2] M77693 M77693 Hsa.2015 gene 1 "Spermidine/spermine N1-acetyltransferase mRNA, complete cds. " [3] R50864 R50864 Hsa.24948 3' UTR 2a 37564 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN K (Homo sapiens) [4] X16135 X16135 Hsa.2779 gene 1 "Human mRNA for novel heterogeneous nuclear RNP protein, L protein. " [5] L10911 L10911 Hsa.256 gene 1 "Homo sapiens splicing factor (CC1.4) mRNA, complete cds. " [6] U14588 U14588 Hsa.2232 gene 1 "Human paxillin mRNA, complete cds. " [7] X55187 X55187 Hsa.2560 gene 1 "Human mRNA for alpha-actinin, partial cds. " [8] M90104 M90104 Hsa.1990 gene 1 "Human splicing factor SC35 mRNA, complete cds. " [9] R27813 R27813 Hsa.26083 3' UTR 2a 134592 EBV-INDUCED G PROTEIN-COUPLED RECEPTOR 2 (Homo sapiens) [10] X66975 X66975 Hsa.2778 gene 1 H.sapiens mRNA for heterogeneous nuclear ribonucleoprotein. [11] X66924 X66924 Hsa.2769 gene 1 H.sapiens heir-1 mRNA for helix-loop-helix protein. [12] H15069(1) H15069 Hsa.26719 3' UTR 2a 49237 PROTEIN KINASE CLK (Mus musculus) [13] T90280 T90280 Hsa.2316 3' UTR 1 110884 RIBOPHORIN II PRECURSOR (HUMAN);. [14] M69043 M69043 Hsa.262 gene 1 MAJOR HISTOCOMPATIBILITY COMPLEX ENHANCER-BINDING PROTEIN (HUMAN);. [15] X74295 X74295 Hsa.2553 gene 1 H.sapiens mRNA for alpha 7B integrin. [16] R80855 R80855 Hsa.25813 3' UTR 2a 146539 MAJOR HISTOCOMPATIBILITY COMPLEX ENHANCER-BINDING PROTEIN MAD3 (Homo sapiens) ------------------------------------------------------------ clusterID = 73 # of genes = 1 -------------------------- [1] X02874 X02874 Hsa.67 gene 1 "Human mRNA for (2'-5') oligo A synthetase E (1,6 kb RNA). " ------------------------------------------------------------ clusterID = 74 # of genes = 4 -------------------------- [1] R80612 R80612 Hsa.1036 3' UTR 1 147093 "PHOSPHOLIPASE A2, MEMBRANE ASSOCIATED PRECURSOR (HUMAN);. " [2] M94132 M94132 Hsa.316 gene 1 Human mucin 2 (MUC2) mRNA sequence. [3] L08044 L08044 Hsa.1127 gene 1 "Human intestinal trefoil factor mRNA, complete cds. " [4] M31994 M31994 Hsa.1240 gene 1 "Human cytosolic aldehyde dehydrogenase (ALDH1) gene, exon 13. " ------------------------------------------------------------ clusterID = 75 # of genes = 30 -------------------------- [1] M86842 M86842 Hsa.68 gene 1 "Human cAMP response element regulatory protein (CREB2) mRNA, complete cds. " [2] T65594 T65594 Hsa.7671 3' UTR 2a 21833 SRC SUBSTRATE P80/85 PROTEINS (Gallus gallus) [3] H47646 H47646 Hsa.9667 3' UTR 1 193666 "Human mRNA for ZFM1 protein, complete cds. " [4] H17646 H17646 Hsa.5464 3' UTR 1 50603 ELONGATION FACTOR 1-DELTA (HUMAN);. [5] R37428 R37428 Hsa.4996 3' UTR 1 26100 "Human unknown protein mRNA, partial cds. " [6] M94630 M94630 Hsa.726 gene 1 "Homo sapiens hnRNP-C like protein mRNA, complete cds. " [7] T71643 T71643 Hsa.6422 3' UTR 2a 110357 CYCLIC-AMP-DEPENDENT TRANSCRIPTION FACTOR ATF-4 (Homo sapiens) [8] H89087 H89087 Hsa.6458 3' UTR 2a 253224 SPLICING FACTOR SC35 (Homo sapiens) [9] M62831 M62831 Hsa.741 gene 1 "Human transcription factor ETR101 mRNA, complete cds. " [10] X90858 X90858 Hsa.41322 gene 1 H.sapiens mRNA for uridine phosphorylase. [11] R37480 R37480 Hsa.884 3' UTR 1 28595 LEUKOTRIENE A-4 HYDROLASE (HUMAN);. [12] X72018 X72018 Hsa.895 gene 1 H.sapiens hTGR 1 mRNA. [13] T50321 T50321 Hsa.9816 3' UTR 2a 72106 APOLIPOPROTEIN A-I PRECURSOR (Homo sapiens) [14] D78134 D78134 Hsa.4756 gene 1 Human mRNA for CIRP. [15] R43914 R43914 Hsa.4937 3' UTR 2a 33065 CREB-BINDING PROTEIN (Mus musculus) [16] R96357 R96357 Hsa.7203 3' UTR 2a 197929 POLYADENYLATE-BINDING PROTEIN (Xenopus laevis) [17] R61324 R61324 Hsa.6438 3' UTR 2a 42469 GALACTOSYLTRANSFERASE ASSOCIATED PROTEIN KINASE P58/GTA (Homo sapiens) [18] R56443 R56443 Hsa.8551 3' UTR 2a 40981 TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0 (Herpes simplex virus) [19] T96873 T96873 Hsa.8040 3' UTR 2a 121343 HYPOTHETICAL PROTEIN IN TRPE 3'REGION (Spirochaeta aurantia) [20] T40454 T40454 Hsa.8781 3' UTR 2a 60221 ANTIGENIC SURFACE DETERMINANT PROTEIN OA3 PRECURSOR (Homo sapiens) [21] D63876 D63876 Hsa.5141 gene 1 Human mRNA for ORF. [22] H72234 H72234 Hsa.7 3' UTR 1 213492 DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE (HUMAN);. [23] T50500 T50500 Hsa.9711 3' UTR 2a 77136 PLACENTAL THROMBIN INHIBITOR (Homo sapiens) [24] R38736 R38736 Hsa.6619 3' UTR 2a 24761 HYPOTHETICAL TRP-ASP REPEATS CONTAINING PROTEIN IN SSC3-ERS1 INTERGENIC REGION (Saccharomyces cerevisiae) [25] R52081 R52081 Hsa.9744 3' UTR 2a 40295 TRANSCRIPTIONAL ACTIVATOR GCN5 (Saccharomyces cerevisiae) [26] H87135 H87135 Hsa.45446 3' UTR 2a 252431 IMMEDIATE-EARLY PROTEIN IE180 (Pseudorabies virus) [27] U34074 U34074 Hsa.41346 gene 1 "Human A kinase anchor protein S-AKAP84 mRNA, nuclear gene encoding mitochondrial protein, complete cds. " [28] J03569 J03569 Hsa.584 gene 1 "Human lymphocyte activation antigen 4F2 large subunit mRNA, complete cds. " [29] J05032 J05032 Hsa.601 gene 1 "Human aspartyl-tRNA synthetase alpha-2 subunit mRNA, complete cds. " [30] X62048 X62048 Hsa.6782 gene 1 H.sapiens Wee1 hu gene. ------------------------------------------------------------ clusterID = 76 # of genes = 14 -------------------------- [1] U20982 U20982 Hsa.1532 gene 1 "Human insulin-like growth factor binding protein-4 (IGFBP4) gene, promoter and complete cds. " [2] T60155 T60155 Hsa.1221 3' UTR 1 81422 "ACTIN, AORTIC SMOOTH MUSCLE (HUMAN);. " [3] M85289 M85289 Hsa.1515 gene 1 "Human heparan sulfate proteoglycan (HSPG2) mRNA, complete cds. " [4] T62864 T62864 Hsa.1485 3' UTR 1 79590 "GUANINE NUCLEOTIDE-BINDING PROTEIN G(S), ALPHA SUBUNIT (HUMAN);. " [5] T93284 T93284 Hsa.11850 3' UTR 2a 118800 COMPLEMENT C1S COMPONENT PRECURSOR (Homo sapiens) [6] T53889 T53889 Hsa.1288 3' UTR 1 78017 COMPLEMENT C1R COMPONENT PRECURSOR (HUMAN). [7] Y00097 Y00097 Hsa.14 gene 1 Human mRNA for protein p68. [8] X05610 X05610 Hsa.1347 gene 1 Human mRNA for type IV collagen alpha (2) chain. [9] M81635 M81635 Hsa.1659 gene 1 "Homo sapiens erythrocyte membrane protein mRNA, complete cds. " [10] T62067 T62067 Hsa.11854 3' UTR 2a 85658 COMPLEMENT C3 PRECURSOR (Mus musculus) [11] M92843 M92843 Hsa.1682 gene 1 TRISTETRAPROLINE (HUMAN);. [12] X86809 X86809 Hsa.1569 gene 1 H.sapiens mRNA for major astrocytic phosphoprotein PEA-15. [13] M14539 M14539 Hsa.1444 gene 1 "Human factor XIII subunit a mRNA, 3' end. " [14] T61333 T61333 Hsa.11582 3' UTR 2a 78034 METALLOPROTEINASE INHIBITOR 3 PRECURSOR (Gallus gallus) ------------------------------------------------------------ clusterID = 77 # of genes = 6 -------------------------- [1] control(1) control HSAC07 [2] control(2) control HSAC07 [3] control(3) control HSAC07 [4] control(4) control HSAC07 [5] H50623 H50623 Hsa.915 3' UTR 1 186767 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-7 BETA CHAIN (HUMAN);. " [6] H27771 H27771 Hsa.36010 3' UTR 2a 162849 G1/S-SPECIFIC CYCLIN D1 (Homo sapiens) ------------------------------------------------------------ clusterID = 78 # of genes = 13 -------------------------- [1] T47342 T47342 Hsa.9235 3' UTR 2a 70818 "PHOSPHOGLYCERATE MUTASE, BRAIN FORM (Homo sapiens) " [2] T54364 T54364 Hsa.57 3' UTR 1 69078 PROTEASOME COMPONENT C2 (HUMAN). [3] T89115 T89115 Hsa.6617 3' UTR 2a 117480 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN K (Homo sapiens) [4] R60195 R60195 Hsa.9856 3' UTR 2a 42829 EUKARYOTIC INITIATION FACTOR 4B (Homo sapiens) [5] H89092 H89092 Hsa.7784 3' UTR 1 253225 H.sapiens mRNA for 17-beta-hydroxysteroid dehydrogenase. [6] M37583 M37583 Hsa.816 gene 1 "Human histone (H2A.Z) mRNA, complete cds. " [7] H04802 H04802 Hsa.6910 3' UTR 2a 43947 "DIHYDROPRYRIDINE-SENSITIVE L-TYPE, SKELETAL MUSCLE CALCIUM CHANNEL GAMMA SUBUNIT (Homo sapiens) " [8] H45977 H45977 Hsa.5130 3' UTR 2a 177774 HOMEOTIC GENE REGULATOR (Drosophila melanogaster) [9] M59040 M59040 Hsa.663 gene 1 "Human cell adhesion molecule (CD44) mRNA, complete cds. " [10] T84049 T84049 Hsa.6288 3' UTR 2a 114175 SET PROTEIN (Homo sapiens) [11] L37792 L37792 Hsa.485 gene 1 "Human syntaxin 1A mRNA, complete cds. " [12] H45251 H45251 Hsa.8085 3' UTR 2a 182771 HOMEOTIC GENE REGULATOR (Drosophila melanogaster) [13] X93510 X93510 Hsa.41369 gene 1 H.sapiens mRNA for 37 kDa LIM domain protein. ------------------------------------------------------------ clusterID = 79 # of genes = 6 -------------------------- [1] H17434 H17434 Hsa.22762 3' UTR 1 50609 NUCLEOLIN (HUMAN);. [2] T85247 T85247 Hsa.2359 3' UTR 1 111192 CYTOCHROME C OXIDASE POLYPEPTIDE VIC PRECURSOR (HUMAN);. [3] D26068 D26068 Hsa.2499 gene 1 "Human mRNA (KIAA0038) for ORF, partial cds. " [4] R08021 R08021 Hsa.21562 3' UTR 2a 127104 INORGANIC PYROPHOSPHATASE (Bos taurus) [5] R41873 R41873 Hsa.23824 3' UTR 2a 31960 PUTATIVE 126.9 KD TRANSCRIPTIONAL REGULATORY PROTEIN IN YSW1-RIB7 INTERGENIC REGION (Saccharomyces cerevisiae) [6] M22760 M22760 Hsa.2197 gene 1 "Homo sapiens nuclear-encoded mitochondrial cytochrome c oxidase Va subunit mRNA, complete cds. " ------------------------------------------------------------ clusterID = 80 # of genes = 3 -------------------------- [1] H04235 H04235 Hsa.1840 3' UTR 1 151761 MUCIN 1 PRECURSOR (HUMAN);. [2] J04813 J04813 Hsa.146 gene 1 "Human cytochrome P450 PCN3 gene, complete cds. " [3] X52228 X52228 Hsa.2354 gene 1 Human mRNA for secreted epithelial tumour mucin antigen. ------------------------------------------------------------ clusterID = 81 # of genes = 17 -------------------------- [1] D21260 D21260 Hsa.2489 gene 1 "Human mRNA (KIAA0034) for ORF (rat cathrin heavy chain homologue), complete cds. " [2] R01221 R01221 Hsa.2393 3' UTR 1 124104 "Human transcription factor TFIIA small subunit p12 mRNA, complete cds. " [3] H40416 H40416 Hsa.25 3' UTR 1 175289 "ATP SYNTHASE BETA CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN);. " [4] Z14244 Z14244 Hsa.2654 gene 1 H.sapiens coxVIIb mRNA for cytochrome c oxidase subunit VIIb. [5] Y00815 Y00815 Hsa.2348 gene 1 Human mRNA for LCA-homolog. LAR protein (leukocyte antigen related). [6] J04026 J04026 Hsa.2060 gene 1 "Human thioredoxin (TXN) mRNA, complete cds. " [7] R60883 R60883 Hsa.25748 3' UTR 2a 42504 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ(W1.1) BETA CHAIN PRECURSOR (Homo sapiens) " [8] D13641 D13641 Hsa.2503 gene 1 "Human mRNA for ORF, complete cds. " [9] R44363 R44363 Hsa.25481 3' UTR 2a 34509 EPIDERMAL GROWTH FACTOR PRECURSOR (Mus musculus) [10] X76648 X76648 Hsa.2145 gene 1 H.sapiens mRNA for glutaredoxin. [11] U07802 U07802 Hsa.2448 gene 1 "Human Tis11d gene, complete cds. " [12] D13630 D13630 Hsa.2509 gene 1 "Human mRNA for ORF, complete cds. " [13] R15814 R15814 Hsa.2330 3' UTR 1 53316 "P14152 MALATE DEHYDROGENASE, CYTOPLASMIC ;. " [14] L06132 L06132 Hsa.2091 gene 1 OUTER MITOCHONDRIAL MEMBRANE PROTEIN PORIN (HUMAN);. [15] U12387 U12387 Hsa.2467 gene 1 "Human thiopurine methyltransferase (TPMT) mRNA, complete cds. " [16] Z13009 Z13009 Hsa.2687 gene 1 H.sapiens mRNA for E-cadherin. [17] H72850 H72850 Hsa.2573 3' UTR 1 214018 "5-AMINOLEVULINIC ACID SYNTHASE MITOCHONDRIAL PRECURSOR, (HUMAN);. " ------------------------------------------------------------ clusterID = 82 # of genes = 6 -------------------------- [1] M26481 M26481 Hsa.695 gene 1 "Homo sapiens KS1/4 antigen mRNA, complete cds. " [2] M25160 M25160 Hsa.2475 gene 1 "Human Na,K-ATPase beta subunit (ATP1B) gene, exons 3 through 6. " [3] L33930 L33930 Hsa.654 gene 1 "Homo sapiens CD24 signal transducer mRNA, complete cds and 3' region. " [4] M35252 M35252 Hsa.687 gene 1 Human CO-029. [5] T54303 T54303 Hsa.710 3' UTR 1 69022 "KERATIN, TYPE II CYTOSKELETAL 8 (HUMAN). " [6] X68314 X68314 Hsa.2753 gene 1 H.sapiens mRNA for glutathione peroxidase-GI. ------------------------------------------------------------ clusterID = 83 # of genes = 24 -------------------------- [1] X87838 X87838 Hsa.3197 gene 1 H.sapiens mRNA for beta-catenin. [2] L16510 L16510 Hsa.304 gene 1 "Homo sapiens cathepsin B mRNA, complete cds. " [3] R67075 R67075 Hsa.31882 3' UTR 2a 140771 ZINC FINGER X-CHROMOSOMAL PROTEIN (Mus musculus) [4] X15183 X15183 Hsa.2795 gene 1 Human mRNA for 90-kDa heat-shock protein. [5] H40705 H40705 Hsa.3121 3' UTR 1 191092 "MYOSIN REGULATORY LIGHT CHAIN 2, NONSARCOMERIC (HUMAN);. " [6] Y00345 Y00345 Hsa.2950 gene 1 Human mRNA for polyA binding protein. [7] H49587 H49587 Hsa.30128 3' UTR 2a 178757 "INTERFERON-INDUCED, DOUBLE-STRANDED RNA-ACTIVATED PROTEIN KINASE (Homo sapiens) " [8] H39654 H39654 Hsa.36291 3' UTR 2a 174719 GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN 12.3 (Homo sapiens) [9] U29171 U29171 Hsa.3228 gene 1 "Human casein kinase I delta mRNA, complete cds. " [10] X65024 X65024 Hsa.321 gene 1 H.sapiens mRNA for xeroderma pigmentosum group C complementing factor (XP-C). [11] T61599 T61599 Hsa.3926 3' UTR 2a 78074 PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG (Arabidopsis thaliana) [12] R54422 R54422 Hsa.28162 3' UTR 2a 39283 "ALKALINE PHOSPHATASE, PLACENTAL TYPE 1 PRECURSOR (Homo sapiens) " [13] X79857 X79857 Hsa.3070 gene 1 H.sapiens HTNT4 mRNA for cardiac troponin T. [14] U09848 U09848 Hsa.364 gene 1 "Human zinc finger protein (ZNF139) mRNA, partial cds. " [15] D31767 D31767 Hsa.3148 gene 1 "Human mRNA (KIAA0058) for ORF (novel protein), complete cds. " [16] H16597 H16597 Hsa.34968 3' UTR 2a 49269 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [17] T92736 T92736 Hsa.3888 3' UTR 2a 118596 CLATHRIN COAT ASSEMBLY PROTEIN AP50 (Rattus norvegicus) [18] H40269 H40269 Hsa.37553 3' UTR 2a 191778 PHOSPHOGLYCERATE KINASE 1 (Homo sapiens) [19] H51196 H51196 Hsa.40619 3' UTR 2a 179691 INSULIN RECEPTOR-RELATED RECEPTOR PRECURSOR (Cavia porcellus) [20] R32511 R32511 Hsa.2789 3' UTR 1 135395 H.sapiens mRNA for RNA polymerase II subunit. [21] R64115 R64115 Hsa.31630 3' UTR 2a 139618 ADENOSYLHOMOCYSTEINASE (Homo sapiens) [22] R71651 R71651 Hsa.32411 3' UTR 2a 142994 ACTIN DEPOLYMERIZING FACTOR (Lilium longiflorum) [23] U09367 U09367 Hsa.345 gene 1 Human zinc finger protein ZNF136. [24] R99935 R99935 Hsa.40211 3' UTR 2a 201757 DNA-DIRECTED RNA POLYMERASE I LARGEST SUBUNIT (Trypanosoma brucei brucei) ------------------------------------------------------------ clusterID = 84 # of genes = 17 -------------------------- [1] R22197 R22197 Hsa.3002 3' UTR 1 130829 60S RIBOSOMAL PROTEIN L32 (HUMAN);. [2] T61602 T61602 Hsa.3006 3' UTR 1 78084 40S RIBOSOMAL PROTEIN S11 (HUMAN);. [3] T51560 T51560 Hsa.2019 3' UTR 1 72227 40S RIBOSOMAL PROTEIN S16 (HUMAN). [4] H77302 H77302 Hsa.3094 3' UTR 1 233465 60S RIBOSOMAL PROTEIN (HUMAN);. [5] X55715 X55715 Hsa.2800 gene 1 Human Hums3 mRNA for 40S ribosomal protein s3. [6] T52185 T52185 Hsa.1985 3' UTR 1 71940 P17074 40S RIBOSOMAL PROTEIN. [7] T57633 T57633 Hsa.3566 3' UTR 1 75467 40S RIBOSOMAL PROTEIN S8 (HUMAN). [8] T53396(1) T53396 Hsa.3409 3' UTR 2a 68775 60S ACIDIC RIBOSOMAL PROTEIN P1 (Polyorchis penicillatus) [9] T95063 T95063 Hsa.3017 3' UTR 1 120122 40S RIBOSOMAL PROTEIN S26 (HUMAN);. [10] T57630 T57630 Hsa.3003 3' UTR 1 75459 S34195 RIBOSOMAL PROTEIN L3 -. [11] R83904 R83904 Hsa.3769 3' UTR 2a 186645 ER LUMEN PROTEIN RETAINING RECEPTOR 1 (Homo sapiens) [12] T79152 T79152 Hsa.3001 3' UTR 1 113545 60S RIBOSOMAL PROTEIN L19 (HUMAN);. [13] M32405 M32405 Hsa.41124 gene 1 "Human homologue of rat insulinoma gene (rig), exons 1-4. " [14] T95048 T95048 Hsa.3007 3' UTR 1 120096 S22051 RIBOSOMAL PROTEIN HS24 - ;. [15] U31215 U31215 Hsa.36665 gene 1 "Human metabotropic glutamate receptor 1 alpha (mGluR1alpha) mRNA, complete cds. " [16] T57483 T57483 Hsa.286 3' UTR 1 75189 60S RIBOSOMAL PROTEIN L4 (HUMAN). [17] H46994 H46994 Hsa.35471 3' UTR 2a 178093 VERPROLIN (Saccharomyces cerevisiae) ------------------------------------------------------------ clusterID = 85 # of genes = 9 -------------------------- [1] T51288 T51288 Hsa.2586 3' UTR 1 71780 ARGININOSUCCINATE SYNTHASE (HUMAN). [2] Z17240 Z17240 Hsa.2774 gene 1 Homo sapiens for mRNA encoding HMG2B. [3] X81817 X81817 Hsa.2549 gene 1 H.sapiens BAP31 mRNA. [4] L25081 L25081 Hsa.1972 gene 1 TRANSFORMING PROTEIN RHOC (HUMAN);. [5] L40027 L40027 Hsa.2178 gene 1 "Homo sapiens glycogen synthase kinase 3 mRNA, complete cds. " [6] H02258 H02258 Hsa.19143 3' UTR 2a 150726 VERPROLIN (Saccharomyces cerevisiae) [7] X17042(3) X17042 Hsa.1939 gene 1 Human mRNA for hematopoetic proteoglycan core protein. [8] D28124 D28124 Hsa.2125 gene 1 "Human mRNA for unknown product, complete cds. " [9] R51502 R51502 Hsa.27808 3' UTR 2a 38675 HYPOTHETICAL 40.9 KD PROTEIN C08B11.5 IN CHROMOSOME II (Caenorhabditis elegans) ------------------------------------------------------------ clusterID = 86 # of genes = 6 -------------------------- [1] X15882 X15882 Hsa.3349 gene 1 Human mRNA for collagen VI alpha-2 C-terminal globular domain. [2] X15880 X15880 Hsa.3348 gene 1 Human mRNA for collagen VI alpha-1 C-terminal globular domain. [3] U14394 U14394 Hsa.313 gene 1 "Human tissue inhibitor of metalloproteinases-3 mRNA, complete cds. " [4] R60877 R60877 Hsa.28939 3' UTR 2a 42396 DELTA-CRYSTALLIN ENHANCER BINDING FACTOR (Gallus gallus) [5] H62466 H62466 Hsa.37715 3' UTR 2a 209654 COLLAGEN ALPHA 3(VI) CHAIN (Gallus gallus) [6] M64110 M64110 Hsa.33 gene 1 "Human caldesmon mRNA, complete cds. " ------------------------------------------------------------ clusterID = 87 # of genes = 30 -------------------------- [1] H43908(1) H43908 Hsa.36957 3' UTR 2a 183315 TRANSFORMING GROWTH FACTOR BETA 2 PRECURSOR (Gallus gallus) [2] H43908(2) H43908 Hsa.36957 3' UTR 2a 183315 TRANSFORMING GROWTH FACTOR BETA 2 PRECURSOR (Gallus gallus) [3] T61446 T61446 Hsa.11712 3' UTR 2a 79900 PUTATIVE DNA BINDING PROTEIN A20 (Homo sapiens) [4] X83535 X83535 Hsa.2463 gene 1 H.sapiens mRNA for membrane-type matrix metalloproteinase. [5] X04500 X04500 Hsa.848 gene 1 Human gene for prointerleukin 1 beta. [6] H05966 H05966 Hsa.33982 3' UTR 2a 43697 REGULATOR OF CHROMOSOME CONDENSATION (Homo sapiens) [7] T64878 T64878 Hsa.13624 3' UTR 2a 66714 NEDD5 PROTEIN (Mus musculus) [8] H02630 H02630 Hsa.33699 3' UTR 2a 151355 TRANSCRIPTIONAL REPRESSOR PROTEIN YY1 (Homo sapiens) [9] H22939 H22939 Hsa.35528 3' UTR 2a 51719 GLYCOGENIN (Homo sapiens) [10] U04343 U04343 Hsa.209 gene 1 "Human B70 antigen mRNA, complete cds. " [11] U20158 U20158 Hsa.2529 gene 1 "Human 76 kDa tyrosine phosphoprotein SLP-76 mRNA, complete cds. " [12] U20659 U20659 Hsa.36657 gene 1 "Human RNA polymerase II subunit hsRPB7 mRNA, complete cds. " [13] U05012 U05012 Hsa.215 gene 1 "Human receptor tyrosine kinase TrkC (NTRK3) mRNA, complete cds. " [14] U07664 U07664 Hsa.41164 gene 1 "Human HB9 homeobox gene, exons 2 and 3 and complete cds. " [15] H59599 H59599 Hsa.41956 3' UTR 2a 207240 HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR BETA-SUBUNIT (Mus musculus) [16] M80461 M80461 Hsa.1640 gene 1 "Human B29 mRNA, complete cds. " [17] M28650(1) M28650 Hsa.1414 gene 1 "Human excision repair protein (ERCC-1) mRNA, complete cds. cDNA clone pcDE. " [18] H19272 H19272 Hsa.35201 3' UTR 2a 171859 CIRCUMSPOROZOITE PROTEIN PRECURSOR (Plasmodium berghei yoelii) [19] X69550 X69550 Hsa.2985 gene 1 H.sapiens mRNA for rho GDP-dissociation Inhibitor 1. [20] L35545 L35545 Hsa.2238 gene 1 "Homo sapiens endothelial cell protein C/APC receptor (EPCR) mRNA, complete cds. " [21] U24077 U24077 Hsa.2409 gene 1 "Human p58 natural killer cell receptor precursor mRNA, clone cl-39, complete cds. " [22] J00277 J00277 Hsa.41123 gene 1 "Human (genomic clones lambda-[SK2-T2, HS578T]; cDNA clones RS-[3,4, 6]) c-Ha-ras1 proto-oncogene, complete coding sequence. " [23] R70535 R70535 Hsa.32358 3' UTR 2a 142310 T-CELL RECEPTOR GAMMA CHAIN PRECURSOR V REGION (Mus musculus) [24] R55778 R55778 Hsa.3969 3' UTR 2a 40736 NEDD5 PROTEIN (Mus musculus) [25] X71490 X71490 Hsa.3102 gene 1 "H.sapiens mRNA for vacuolar proton ATPase, subunit D. " [26] R39010 R39010 Hsa.14595 3' UTR 2a 25204 COAGULATION FACTOR XIII B CHAIN PRECURSOR (Mus musculus) [27] X68688 X68688 Hsa.41247 gene 1 H.sapiens ZNF33B gene. [28] R35665 R35665 Hsa.26945 3' UTR 2a 137017 EPIDERMAL GROWTH FACTOR RECEPTOR PRECURSOR (Homo sapiens) [29] R72164 R72164 Hsa.27560 3' UTR 2a 155799 HYPOTHETICAL 76.3 KD PROTEIN K04H4.2 IN CHROMOSOME III (Caenorhabditis elegans) [30] R22953 R22953 Hsa.25229 3' UTR 2a 131309 "CASEIN KINASE I, ALPHA ISOFORM (Bos taurus) " ------------------------------------------------------------ clusterID = 88 # of genes = 11 -------------------------- [1] Z24727 Z24727 Hsa.1130 gene 1 "H.sapiens tropomyosin isoform mRNA, complete CDS. " [2] T53694 T53694 Hsa.10358 3' UTR 2a 69762 "COMPLEMENT C1Q SUBCOMPONENT, A CHAIN PRECURSOR (Homo sapiens) " [3] L19956 L19956 Hsa.142 gene 1 "Human aryl sulfotransferase mRNA, complete cds. " [4] M63167 M63167 Hsa.1033 gene 1 RAC-ALPHA SERINE/THREONINE KINASE (HUMAN);. [5] M69135 M69135 Hsa.1806 gene 1 "Human monoamine oxidase B (MAOB) gene, exon 15. " [6] M83667 M83667 Hsa.1854 gene 1 "Human NF-IL6-beta protein mRNA, complete cds. " [7] J04621 J04621 Hsa.1516 gene 1 SYNDECAN-2 PRECURSOR (HUMAN);contains Alu repetitive element;. [8] T92451 T92451 Hsa.1131 3' UTR 1 118219 "TROPOMYOSIN, FIBROBLAST AND EPITHELIAL MUSCLE-TYPE (HUMAN);. " [9] L37033 L37033 Hsa.17030 gene 1 "Human FK-506 binding protein homologue (FKBP38) mRNA, complete cds. " [10] M96233 M96233 Hsa.1610 gene 1 "Human glutathione transferase class mu number 4 (GSTM4) gene, complete cds. " [11] T95612 T95612 Hsa.12879 3' UTR 2a 120205 TUBULIN--TYROSINE LIGASE (Sus scrofa) ------------------------------------------------------------ clusterID = 89 # of genes = 3 -------------------------- [1] H43887 H43887 Hsa.36952 3' UTR 2a 183264 COMPLEMENT FACTOR D PRECURSOR (Homo sapiens) [2] T94350 T94350 Hsa.8223 3' UTR 2a 119711 PERIPHERAL MYELIN PROTEIN 22 (Homo sapiens) [3] T60778 T60778 Hsa.11616 3' UTR 2a 76539 MATRIX GLA-PROTEIN PRECURSOR (Rattus norvegicus) ------------------------------------------------------------ clusterID = 90 # of genes = 2 -------------------------- [1] M81601 M81601 Hsa.2047 gene 1 "Human transcription elongation factor (SII) mRNA, complete cds. " [2] D43950 D43950 Hsa.1617 gene 1 "Human mRNA (KIAA0098) for ORF (human counterpart of mouse chaperonin containing TCP-1 gene), partial cds. " ------------------------------------------------------------ clusterID = 91 # of genes = 10 -------------------------- [1] R34701 R34701 Hsa.26767 3' UTR 2a 136729 TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP4 (Varicella-zoster virus) [2] X07979 X07979 Hsa.2268 gene 1 Human mRNA for fibronectin receptor beta subunit. [3] R42070 R42070 Hsa.24206 3' UTR 2a 30646 VERPROLIN (Saccharomyces cerevisiae) [4] X65488 X65488 Hsa.2780 gene 1 H.sapiens U21.1 mRNA. [5] Y00970 Y00970 Hsa.2304 gene 1 Human mRNA for acrosin (EC 3.4.21.10). [6] D49396 D49396 Hsa.2179 gene 1 "Human mRNA for Apo1_Human (MER5(Aop1-Mouse)-like protein), complete cds. " [7] D16469 D16469 Hsa.2372 gene 1 "Human mRNA for ORF, Xq terminal portion. " [8] D17530 D17530 Hsa.249 gene 1 "Human mRNA for drebrin E, complete cds. " [9] R56052 R56052 Hsa.24829 3' UTR 2a 40877 [10] H40108 H40108 Hsa.24153 3' UTR 2a 175207 MITOCHONDRIAL ATP-DEPENDENT RNA HELICASE SUV3 PRECURSOR (Saccharomyces cerevisiae) ------------------------------------------------------------ clusterID = 92 # of genes = 5 -------------------------- [1] M31516(1) M31516 Hsa.1380 gene 1 "Human decay-accelerating factor mRNA, complete cds. " [2] M31516(2) M31516 Hsa.1380 gene 1 "Human decay-accelerating factor mRNA, complete cds. " [3] M59371(2) M59371 Hsa.1550 gene 1 TYROSINE-PROTEIN KINASE RECEPTOR ECK PRECURSOR (HUMAN);. [4] J04102 J04102 Hsa.1423 gene 1 "Human erythroblastosis virus oncogene homolog 2 (ets-2) mRNA, complete cds. " [5] R62945 R62945 Hsa.31500 3' UTR 2a 139080 COMPLEMENT DECAY-ACCELERATING FACTOR 1 PRECURSOR (Homo sapiens) ------------------------------------------------------------ clusterID = 93 # of genes = 8 -------------------------- [1] T99498 T99498 Hsa.20034 3' UTR 2a 122563 SERINE/THREONINE-PROTEIN KINASE PAK (Rattus norvegicus) [2] Z46389 Z46389 Hsa.19003 gene 1 Homo sapiens encoding vasodilator-stimulated phosphoprotein (VASP). [3] L08187 L08187 Hsa.2119 gene 1 "Human cytokine receptor (EBI3) mRNA, complete cds. " [4] T99478 T99478 Hsa.20028 3' UTR 2a 122540 GLUCOSE-6-PHOSPHATASE (Homo sapiens) [5] X73358 X73358 Hsa.2568 gene 1 H.sapiens hAES-1 mRNA. [6] X53461 X53461 Hsa.2591 gene 1 Human mRNA for upstream binding factor (hUBF). [7] Z14978 Z14978 Hsa.2561 gene 1 H.sapiens mRNA for actin-related protein. [8] M21186 M21186 Hsa.944 gene 1 "Human neutrophil cytochrome b light chain p22 phagocyte b-cytochrome mRNA, complete cds. " ------------------------------------------------------------ clusterID = 94 # of genes = 14 -------------------------- [1] R28373 R28373 Hsa.810 3' UTR 1 133722 HEMOGLOBIN BETA CHAIN (HUMAN);. [2] R82938 R82938 Hsa.9623 3' UTR 2a 187134 PLACENTAL CALCIUM-BINDING PROTEIN (Homo sapiens) [3] T48102 T48102 Hsa.9407 3' UTR 2a 72159 PROTEIN C PRECURSOR (Homo sapiens) [4] M86400 M86400 Hsa.994 gene 1 "Human phospholipase A2 mRNA, complete cds. " [5] H26101 H26101 Hsa.79 3' UTR 1 161132 AMINOACYLASE-1 (HUMAN);. [6] M59807 M59807 Hsa.949 gene 1 NATURAL KILLER CELLS PROTEIN 4 PRECURSOR (HUMAN);contains element MSR1 repetitive element ;. [7] T48014 T48014 Hsa.8052 3' UTR 1 72078 HEMOGLOBIN ALPHA CHAIN (HUMAN). [8] D00763 D00763 Hsa.61 gene 1 PROTEASOME COMPONENT C9 (HUMAN);. [9] T79595 T79595 Hsa.641 3' UTR 1 113670 "Human calmodulin (CALM1) gene, exons 2,3,4,5 and 6, and complete cds. " [10] T95291 T95291 Hsa.7165 3' UTR 2a 120461 "COMPLEMENT C1Q SUBCOMPONENT, B CHAIN PRECURSOR (Homo sapiens) " [11] R78927 R78927 Hsa.8194 3' UTR 1 146211 COATOMER BETA' SUBUNIT (HUMAN);. [12] H81068 H81068 Hsa.44595 3' UTR 2a 230549 SYNAPTOTAGMIN III (Rattus norvegicus) [13] H20543 H20543 Hsa.6546 3' UTR 2a 51631 DIHYDROXYACETONE KINASE (Citrobacter freundii) [14] T67433 T67433 Hsa.9083 3' UTR 1 81809 ANGIOGENIN PRECURSOR (HUMAN);. ------------------------------------------------------------ clusterID = 95 # of genes = 19 -------------------------- [1] M26697 M26697 Hsa.957 gene 1 "Human nucleolar protein (B23) mRNA, complete cds. " [2] R34698 R34698 Hsa.558 3' UTR 1 136738 INTERFERON-INDUCIBLE PROTEIN 9-27 (HUMAN);. [3] M36981 M36981 Hsa.951 gene 1 "Human putative NDP kinase (nm23-H2S) mRNA, complete cds. " [4] T55248 T55248 Hsa.5544 3' UTR 1 74314 78 KD GLUCOSE REGULATED PROTEIN PRECURSOR (HUMAN). [5] M83751 M83751 Hsa.594 gene 1 Human arginine-rich gene. [6] D63878 D63878 Hsa.8736 gene 1 Human mRNA for ORF. [7] R60859 R60859 Hsa.8596 3' UTR 2a 42288 MATRIN 3 (Homo sapiens) [8] M94556 M94556 Hsa.929 gene 1 SINGLE-STRANDED DNA-BINDING PROTEIN MITOCHONDRIAL PRECURSOR (HUMAN);. [9] H44011 H44011 Hsa.7654 3' UTR 2a 187829 "MYOSIN HEAVY CHAIN, NONMUSCLE TYPE A (Homo sapiens) " [10] M22382 M22382 Hsa.831 gene 1 MITOCHONDRIAL MATRIX PROTEIN P1 PRECURSOR (HUMAN);. [11] R42501 R42501 Hsa.853 3' UTR 1 29607 INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 2 (HUMAN);. [12] R49964 R49964 Hsa.950 3' UTR 1 152738 GLUCOSE-6-PHOSPHATE ISOMERASE (HUMAN);. [13] R10066 R10066 Hsa.7395 3' UTR 2a 128808 PROHIBITIN (Homo sapiens) [14] M88279 M88279 Hsa.852 gene 1 P59 PROTEIN (HUMAN);. [15] H40095 H40095 Hsa.773 3' UTR 1 175181 MACROPHAGE MIGRATION INHIBITORY FACTOR (HUMAN);. [16] X79198 X79198 Hsa.8096 gene 1 H.sapiens HCF-1 gene. [17] T51858 T51858 Hsa.9218 3' UTR 2a 75035 EUKARYOTIC INITIATION FACTOR 4B (Homo sapiens) [18] U09564 U09564 Hsa.462 gene 1 "Human serine kinase mRNA, complete cds. " [19] R56401 R56401 Hsa.7048 3' UTR 2a 40753 RAN-SPECIFIC GTPASE-ACTIVATING PROTEIN (Homo sapiens) ------------------------------------------------------------ clusterID = 96 # of genes = 5 -------------------------- [1] T90759 T90759 Hsa.14842 3' UTR 2a 111435 TUBULIN ALPHA-5 CHAIN (Gallus gallus) [2] J04977 J04977 Hsa.1778 gene 1 "Human Ku autoimmune antigen gene, complete cds. " [3] L14076 L14076 Hsa.1090 gene 1 "Human pre-mRNA splicing factor SRp75 mRNA, complete cds. " [4] U24105 U24105 Hsa.17130 gene 1 "Human coatomer protein (HEPCOP) mRNA, complete cds. " [5] T64128 T64128 Hsa.11042 3' UTR 2a 83823 TRANSCRIPTION FACTOR SP1 (Homo sapiens) ------------------------------------------------------------ clusterID = 97 # of genes = 1 -------------------------- [1] D28137 D28137 Hsa.9174 gene 1 "Human mRNA for BST-2, complete cds. " ------------------------------------------------------------ clusterID = 98 # of genes = 2 -------------------------- [1] X06614(2) X06614 Hsa.1920 gene 1 Human mRNA for receptor of retinoic acid. [2] R39209(1) R39209 Hsa.6317 3' UTR 2a 23464 HUMAN IMMUNODEFICIENCY VIRUS TYPE I ENHANCER-BINDING PROTEIN 2 (Homo sapiens) ------------------------------------------------------------ clusterID = 99 # of genes = 1 -------------------------- [1] T48904 T48904 Hsa.2794 3' UTR 1 70455 HEAT SHOCK 27 KD PROTEIN (HUMAN). ------------------------------------------------------------ clusterID = 100 # of genes = 14 -------------------------- [1] T72889 T72889 Hsa.8126 3' UTR 1 84178 INTERFERON-INDUCIBLE PROTEIN 1-8U (HUMAN);. [2] R49974(2) R49974 Hsa.6977 3' UTR 2a 152762 LEUKOCYTE ANTIGEN CD37 (Homo sapiens) [3] D21261 D21261 Hsa.451 gene 1 SM22-ALPHA HOMOLOG (HUMAN);. [4] J03077 J03077 Hsa.63 gene 1 PROACTIVATOR POLYPEPTIDE PRECURSOR (HUMAN);contains TAR1 repetitive element ;. [5] X57351 X57351 Hsa.5821 gene 1 INTERFERON-INDUCIBLE PROTEIN 1-8D (HUMAN);contains MSR1 repetitive element ;. [6] T51023 T51023 Hsa.832 3' UTR 1 75127 HEAT SHOCK PROTEIN HSP 90-BETA (HUMAN). [7] M26252 M26252 Hsa.996 gene 1 "PYRUVATE KINASE, M2 ISOZYME (HUMAN);. " [8] T69446 T69446 Hsa.80 3' UTR 1 82983 EUKARYOTIC INITIATION FACTOR 4A-I (HUMAN);. [9] H65823 H65823 Hsa.698 3' UTR 1 210511 CYSTATIN B (HUMAN);. [10] X14958 X14958 Hsa.821 gene 1 Human hmgI mRNA for high mobility group protein Y. [11] T59878 T59878 Hsa.702 3' UTR 1 76268 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B PRECURSOR (HUMAN);. [12] M64098 M64098 Hsa.806 gene 1 "Human high density lipoprotein binding protein (HBP) mRNA, complete cds. " [13] H65355 H65355 Hsa.42625 3' UTR 2a 210399 ANNEXIN II (Homo sapiens) [14] M24069 M24069 Hsa.712 gene 1 "Human DNA-binding protein A (dbpA) gene, 3' end. " ------------------------------------------------------------