------------------------------------------------------------ clusterID = 1 # of genes = 1 -------------------------- [1] U21090 U21090 Hsa.41283 gene 1 "Human DNA polymerase delta small subunit mRNA, complete cds. " ------------------------------------------------------------ clusterID = 2 # of genes = 54 -------------------------- [1] T59954 T59954 Hsa.1119 3' UTR 1 79441 THYMOSIN BETA-4 (HUMAN);. [2] T51574 T51574 Hsa.1836 3' UTR 1 72258 40S RIBOSOMAL PROTEIN S24 (HUMAN). [3] H24754 H24754 Hsa.1238 3' UTR 1 160886 FRUCTOSE-BISPHOSPHATE ALDOLASE A (HUMAN);. [4] M11354 M11354 Hsa.1500 gene 1 "Human H3.3 histone, class B mRNA, complete cds. " [5] T89730 T89730 Hsa.10363 3' UTR 2a 117433 TUBULIN BETA-1 CHAIN (Gallus gallus) [6] H46728 H46728 Hsa.10975 3' UTR 2a 177924 HYPOTHETICAL HIT-LIKE PROTEIN HI0961 (Haemophilus influenzae) [7] T54650 T54650 Hsa.10510 3' UTR 2a 73757 "HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, F ALPHA CHAIN PRECURSOR (Homo sapiens) " [8] D14662 D14662 Hsa.120 gene 1 "Human mRNA for ORF, complete cds. " [9] T57686 T57686 Hsa.1137 3' UTR 1 79398 TUBULIN ALPHA-1 CHAIN (HUMAN). [10] T63133 T63133 Hsa.1116 3' UTR 1 79272 THYMOSIN BETA-10 (HUMAN);. [11] M27539 M27539 Hsa.1822 gene 1 "Human MHC class I HLA-A cell surface antigen mRNA, (HLA-A28,-B40, -Cw3), clone LB45. " [12] L09159(1) L09159 Hsa.1181 gene 1 "Homo sapiens RHOA proto-oncogene multi-drug-resistance protein mRNA, 3' end. " [13] T74556 T74556 Hsa.1190 3' UTR 1 84680 "ATP SYNTHASE ALPHA CHAIN, MITOCHONDRIAL PRECURSOR (HUMAN);. " [14] T63591 T63591 Hsa.1006 3' UTR 1 79994 60S ACIDIC RIBOSOMAL PROTEIN P0 (HUMAN);. [15] H48027 H48027 Hsa.100 3' UTR 1 193650 ATP SYNTHASE LIPID-BINDING PROTEIN P1 PRECURSOR (HUMAN);. [16] M84739 M84739 Hsa.1050 gene 1 "Human autoantigen calreticulin mRNA, complete cds. " [17] X61971 X61971 Hsa.1178 gene 1 H.sapiens mRNA for macropain subunit delta. [18] D14696 D14696 Hsa.122 gene 1 Human mRNA (KIAA0026) for ORF (complete cds) and HepG2 mRNA identical sequence. [19] M65028 M65028 Hsa.1044 gene 1 "Human hnRNP type A/B protein mRNA, complete cds. " [20] H46732 H46732 Hsa.1738 3' UTR 1 177923 14 KD PROTEIN OF SIGNAL RECOGNITION PARTICLE (HUMAN);contains PTR5 repetitive element ;. [21] M93010 M93010 Hsa.1804 gene 1 "Human epithelial cell marker protein 1 (HMe1) mRNA, complete cds. " [22] T87527 T87527 Hsa.17649 3' UTR 2a 115413 HEAT SHOCK PROTEIN HSP 84 (Mus musculus) [23] T52642 T52642 Hsa.10176 3' UTR 2a 67177 GUANYLATE KINASE HOMOLOG (Vaccinia virus) [24] H69869 H69869 Hsa.1277 3' UTR 1 212381 CLATHRIN LIGHT CHAIN A (HUMAN);. [25] R73052 R73052 Hsa.1687 3' UTR 1 156448 "Homo sapiens growth-arrest-specific protein (gas) mRNA, complete cds. " [26] R80966 R80966 Hsa.1278 3' UTR 1 147324 CLATHRIN LIGHT CHAIN B (HUMAN);. [27] R44884 R44884 Hsa.1121 3' UTR 1 33865 "ADP,ATP CARRIER PROTEIN, LIVER ISOFORM T2 (HUMAN);. " [28] R70016 R70016 Hsa.1558 3' UTR 1 142466 "Human F-actin capping protein beta subunit mRNA, complete cds. " [29] M21339 M21339 Hsa.1504 gene 1 "Human non-histone chromosomal protein HMG-14 gene, complete cds. " [30] T52343 T52343 Hsa.1473 3' UTR 1 72030 GLUTATHIONE PEROXIDASE (HUMAN). [31] L09159(2) L09159 Hsa.1181 gene 1 "Homo sapiens RHOA proto-oncogene multi-drug-resistance protein mRNA, 3' end. " [32] J03544 J03544 Hsa.1821 gene 1 "Human brain glycogen phosphorylase mRNA, complete cds. " [33] K03001 K03001 Hsa.1239 gene 1 Human aldehyde dehydrogenase 2 mRNA. [34] J04173 J04173 Hsa.1896 gene 1 "PHOSPHOGLYCERATE MUTASE, BRAIN FORM (HUMAN);. " [35] M23114 M23114 Hsa.1542 gene 1 "Homo sapiens calcium-ATPase (HK1) mRNA, complete cds. " [36] X55362 X55362 Hsa.1867 gene 1 Human odc1 mRNA for ornithine decarboxylase. [37] D00265 D00265 Hsa.17 gene 1 "Human cytochrome c mRNA, carboxyl-terminal region and 3' non-coding region. " [38] T49732 T49732 Hsa.1591 3' UTR 1 67988 "Human SnRNP core protein Sm D2 mRNA, complete cds. " [39] T51571 T51571 Hsa.1207 3' UTR 1 72250 P24480 CALGIZZARIN. [40] T53412 T53412 Hsa.1773 3' UTR 1 68806 "KERATIN, TYPE I CYTOSKELETAL 18 (HUMAN). " [41] R52000 R52000 Hsa.1739 3' UTR 1 39861 PLACENTAL RIBONUCLEASE INHIBITOR (HUMAN);. [42] U02493(1) U02493 Hsa.168 gene 1 "Human 54 kDa protein mRNA, complete cds. " [43] T54276 T54276 Hsa.1567 3' UTR 1 69195 PROTEASOME COMPONENT C13 (HUMAN). [44] L00352 L00352 Hsa.17353 gene 1 "Human low density lipoprotein receptor gene, exon 18. " [45] R88740 R88740 Hsa.1272 3' UTR 1 194984 "ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL PRECURSOR (HUMAN);. " [46] R23889 R23889 Hsa.18401 3' UTR 2a 131036 TRANSFERRIN RECEPTOR PROTEIN (Homo sapiens) [47] U07132 U07132 Hsa.1694 gene 1 "Human steroid hormone receptor Ner-I mRNA, complete cds. " [48] H49652 H49652 Hsa.12893 3' UTR 2a 274422 "P01096 ATPASE INHIBITOR, MITOCHONDRIAL ;. " [49] R80703 R80703 Hsa.14885 3' UTR 2a 146807 TUMOR-ASSOCIATED ANTIGEN CO-029 (Homo sapiens) [50] D14658 D14658 Hsa.116 gene 1 "Human mRNA for ORF, complete cds. " [51] J04046 J04046 Hsa.1309 gene 1 "Human calmodulin mRNA, complete cds. " [52] T60855 T60855 Hsa.11628 3' UTR 2a 76721 CALCINEURIN B SUBUNIT ISOFORM 1 (Homo sapiens) [53] H04282 H04282 Hsa.16501 3' UTR 2a 152143 "DOPAMINE- AND CAMP-REGULATED NEURONAL PHOSPHOPROTEIN, DARPP-32 (Bos taurus) " [54] M84349 M84349 Hsa.1325 gene 1 "Human transmembrane protein (CD59) gene, exon 4. " ------------------------------------------------------------ clusterID = 3 # of genes = 5 -------------------------- [1] X77956 X77956 Hsa.2806 gene 1 H.sapiens Id1 mRNA. [2] X87342 X87342 Hsa.3180 gene 1 H.sapiens mRNA for human giant larvae homolog. [3] X51416 X51416 Hsa.3040 gene 1 Human mRNA for steroid hormone receptor hERR1. [4] L32977 L32977 Hsa.3813 gene 1 "Homo sapiens (clone f17252) ubiquinol cytochrome c reductase Rieske iron-sulphur protein (UQCRFS1) gene, exon 2. " [5] U27337 U27337 Hsa.36678 gene 1 "Human alpha (1,3) fucosyltransferase (FUT6) mRNA, minor transcript III, complete cds. " ------------------------------------------------------------ clusterID = 4 # of genes = 6 -------------------------- [1] R71401 R71401 Hsa.25142 3' UTR 2a 155096 "HEMOGLOBIN ALPHA-1, ALPHA-2, AND ALPHA-3 CHAINS (Macaca assamenses) " [2] X01410 X01410 Hsa.2035 gene 1 H.sapiens mRNA fragment for T-cell receptor beta chain D-J-C (JUR-beta 2). [3] H42884 H42884 Hsa.36897 3' UTR 2a 183086 INTERFERON REGULATORY FACTOR 1 (Homo sapiens) [4] M59819 M59819 Hsa.2209 gene 1 "Human granulocyte colony-stimulating factor receptor (G-CSFR-2) mRNA, complete cds. " [5] X02228 X02228 Hsa.818 gene 1 Human HLA-DP-beta 1 gene and HLA-DP-alpha-1 gene exon 1. [6] R53455 R53455 Hsa.3921 3' UTR 2a 39833 SERINE CARBOXYPEPTIDASE I PRECURSOR (Hordeum vulgare) ------------------------------------------------------------ clusterID = 5 # of genes = 10 -------------------------- [1] M19045 M19045 Hsa.891 gene 1 "Human lysozyme mRNA, complete cds. " [2] R81330 R81330 Hsa.8133 3' UTR 2a 147723 MYRISTOYLATED ALANINE-RICH C-KINASE SUBSTRATE (Homo sapiens) [3] T65740 T65740 Hsa.5756 3' UTR 2a 80348 SINGLE-STRANDED DNA BINDING PROTEIN P9 PRECURSOR (Mus musculus) [4] H63354 H63354 Hsa.42442 3' UTR 2a 209278 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [5] M37721 M37721 Hsa.974 gene 1 PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE PRECURSOR (HUMAN);contains Alu repetitive element;. [6] H11374 H11374 Hsa.4153 3' UTR 2a 47526 14-3-3-LIKE PROTEIN (Xenopus laevis) [7] X80507 X80507 Hsa.9574 gene 1 H.sapiens YAP65 mRNA. [8] H65425 H65425 Hsa.4286 3' UTR 2a 238508 FIBRONECTIN RECEPTOR BETA SUBUNIT PRECURSOR (Homo sapiens) [9] R67999 R67999 Hsa.5908 3' UTR 2a 138262 PROBABLE ATP-DEPENDENT RNA HELICASE PRH1 (Schizosaccharomyces pombe) [10] D00760 D00760 Hsa.58 gene 1 PROTEASOME COMPONENT C3 (HUMAN);. ------------------------------------------------------------ clusterID = 6 # of genes = 7 -------------------------- [1] H58397 H58397 Hsa.449 3' UTR 1 205866 "TRANS-1,2-DIHYDROBENZENE-1,2-DIOL DEHYDROGENASE (HUMAN);. " [2] H77597 H77597 Hsa.2715 3' UTR 1 214162 H.sapiens mRNA for metallothionein (HUMAN);. [3] D15049 D15049 Hsa.329 gene 1 Human mRNA for protein tyrosine phosphatase. [4] M22538 M22538 Hsa.928 gene 1 NADH-UBIQUINONE DEHYDROGENASE 24 KD SUBUNIT PRECURSOR (HUMAN);. [5] T51539 T51539 Hsa.9994 3' UTR 2a 72395 HEPATOCYTE GROWTH FACTOR-LIKE PROTEIN PRECURSOR (Homo sapiens) --68dd_5699-4733_4d62-1290_1927 Content-Type: application/octet-stream Content-Transfer-Encoding: 7bit Content-MD5: NAlwVJQ4msWkg7LKaY/Asw== Content-Description: rank2b.info [6] M36634 M36634 Hsa.2097 gene 1 "Human vasoactive intestinal peptide (VIP) mRNA, complete cds. " [7] M84490 M84490 Hsa.865 gene 1 "Human extracellular signal-regulated kinase 1 mRNA, 3' end. " ------------------------------------------------------------ clusterID = 7 # of genes = 28 -------------------------- [1] X02152 X02152 Hsa.2846 gene 1 "Human mRNA for lactate dehydrogenase-A (LDH-A, EC 1.1.1.27). " [2] T69748 T69748 Hsa.2933 3' UTR 1 108186 PHOSPHOGLYCERATE KINASE 1 (HUMAN);. [3] R43913 R43913 Hsa.3157 3' UTR 1 32966 P37879 LYSYL-TRNA SYNTHETASE ;. [4] X12671 X12671 Hsa.3306 gene 1 Human gene for heterogeneous nuclear ribonucleoprotein (hnRNP) core protein A1. [5] X51345 X51345 Hsa.2830 gene 1 Human jun-B mRNA for JUN-B protein. [6] X70944 X70944 Hsa.2966 gene 1 H.sapiens mRNA for PTB-associated splicing factor. [7] X05276 X05276 Hsa.3067 gene 1 Human mRNA for fibroblast tropomyosin TM30 (pl). [8] X70326 X70326 Hsa.2863 gene 1 H.sapiens MacMarcks mRNA. [9] H87240 H87240 Hsa.287 3' UTR 1 220392 P29595 UBIQUITIN-LIKE PROTEIN NEDD-8 ;. [10] U29607 U29607 Hsa.3278 gene 1 "Human methionine aminopeptidase mRNA, complete cds. " [11] D50063 D50063 Hsa.36683 gene 1 Human mRNA for proteasome subunit p40 (Mov34). [12] T86473 T86473 Hsa.3331 3' UTR 1 114645 NUCLEOSIDE DIPHOSPHATE KINASE A (HUMAN);. [13] X82103 X82103 Hsa.3115 gene 1 H.sapiens mRNA for beta-COP. [14] Z47087 Z47087 Hsa.3198 gene 1 H.sapiens mRNA for RNA polymerase II elongation factor-like protein. [15] R98842 R98842 Hsa.40063 3' UTR 2a 207029 PROTHYMOSIN ALPHA (Homo sapiens) [16] T56690 T56690 Hsa.3648 3' UTR 2a 69419 CHLORINE CHANNEL PROTEIN P64 (Bos taurus) [17] T92259 T92259 Hsa.2962 3' UTR 1 118111 PROTEASOME IOTA CHAIN (HUMAN);. [18] X69910 X69910 Hsa.2922 gene 1 H.sapiens p63 mRNA for transmembrane protein. [19] U29175 U29175 Hsa.399 gene 1 "Human estrogen receptor (BRG1) mRNA, complete cds. " [20] X68194 X68194 Hsa.2793 gene 1 H.sapiens h-Sp1 mRNA. [21] T84082 T84082 Hsa.2832 3' UTR 1 111253 ER LUMEN PROTEIN RETAINING RECEPTOR 1 (HUMAN);. [22] D10522(1) D10522 Hsa.32 gene 1 "Human mRNA for 80K-L protein, complete cds. (HUMAN);contains element TAR1 repetitive element ;. " [23] D10522(2) D10522 Hsa.32 gene 1 "Human mRNA for 80K-L protein, complete cds. (HUMAN);contains element TAR1 repetitive element ;. " [24] L41559 L41559 Hsa.3252 gene 1 "Homo sapiens pterin-4a-carbinolamine dehydratase (PCBD) mRNA, complete cds. " [25] X74262 X74262 Hsa.2808 gene 1 H.sapiens RbAp48 mRNA encoding retinoblastoma binding protein. [26] Y00971 Y00971 Hsa.2964 gene 1 Human mRNA for phosphoriobosyl pyrophosphate synthetase subunit II (EC 2.7.6.1). [27] U20998 U20998 Hsa.3316 gene 1 "Homo sapiens signal recognition particle subunit 9 (SRP9) mRNA, complete cds. " [28] U20972 U20972 Hsa.3315 gene 1 "Human 14-3-3 protein epsilon isoform mRNA, complete cds. " ------------------------------------------------------------ clusterID = 8 # of genes = 4 -------------------------- [1] M86934 M86934 Hsa.1701 gene 1 "Human GS1 (protein of unknown function) mRNA, complete cds. " [2] M28373 M28373 Hsa.1731 gene 1 "Homo sapiens amyloid protein A4 precursor mRNA, 3' end of cds. " [3] T52806 T52806 Hsa.10212 3' UTR 2a 67927 ANTIGEN KI-67 (Homo sapiens) [4] T41204 T41204 Hsa.1209 3' UTR 1 62344 "P14780 92 KD TYPE V COLLAGENASE PRECURSOR ,. " ------------------------------------------------------------ clusterID = 9 # of genes = 4 -------------------------- [1] U10324 U10324 Hsa.491 gene 1 "Human nuclear factor NF90 mRNA, complete cds. " [2] R49416 R49416 Hsa.2280 3' UTR 1 37082 CATHEPSIN H PRECURSOR (HUMAN);. [3] H16991 H16991 Hsa.960 3' UTR 1 50234 NUCLEOLYSIN TIAR (HUMAN);. [4] L25851 L25851 Hsa.855 gene 1 INTEGRIN ALPHA-E PRECURSOR (HUMAN);contains Alu repetitive element;. ------------------------------------------------------------ clusterID = 10 # of genes = 23 -------------------------- [1] D55673 D55673 Hsa.3209 gene 1 Human mRNA for heterogeneous nuclear ribonucleoprotein D (hnRNP D). [2] H15813 H15813 Hsa.34914 3' UTR 2a 159537 CCAAT/ENHANCER BINDING PROTEIN BETA (Homo sapiens) [3] D31887(1) D31887 Hsa.3154 gene 1 "Human mRNA (KIAA0062) for ORF (novel protein), partial cds. " [4] R37114 R37114 Hsa.3876 3' UTR 2a 26050 PROBABLE SERINE/THREONINE-PROTEIN KINASE YHR102W (Saccharomyces cerevisiae) [5] X03484 X03484 Hsa.2975 gene 1 Human mRNA for raf oncogene. [6] H28373 H28373 Hsa.35804 3' UTR 2a 161909 T-CELL PROTEIN-TYROSINE PHOSPHATASE (Homo sapiens) [7] X61587(1) X61587 Hsa.2986 gene 1 H.sapiens rhoG mRNA for GTPase. [8] X78817 X78817 Hsa.3166 gene 1 H.sapiens partial C1 mRNA. [9] T55840 T55840 Hsa.3410 3' UTR 2a 77661 TUMOR-ASSOCIATED ANTIGEN L6 (Homo sapiens) [10] X61587(2) X61587 Hsa.2986 gene 1 H.sapiens rhoG mRNA for GTPase. [11] U02020 U02020 Hsa.326 gene 1 "Human pre-B cell enhancing factor (PBEF) mRNA, complete cds. " [12] M55543 M55543 Hsa.3118 gene 1 INTERFERON-INDUCED GUANYLATE-BINDING PROTEIN 2 (HUMAN);. [13] H25940 H25940 Hsa.28468 3' UTR 2a 162266 PUTATIVE SERINE/THREONINE-PROTEIN KINASE PSK-H1 (Homo sapiens) [14] H02540 H02540 Hsa.3764 3' UTR 1 151270 CATHEPSIN L PRECURSOR (HUMAN);. [15] D31887(2) D31887 Hsa.3154 gene 1 "Human mRNA (KIAA0062) for ORF (novel protein), partial cds. " [16] Z15115 Z15115 Hsa.3071 gene 1 H.sapiens TOP2 mRNA for DNA topoisomerase II (partial). [17] R56630 R56630 Hsa.28641 3' UTR 2a 41088 MYOSIN HEAVY CHAIN KINASE A (Dictyostelium discoideum) [18] X79353 X79353 Hsa.3104 gene 1 H.sapiens XAP-4 mRNA for GDP-dissociation inhibitor. [19] X13482 X13482 Hsa.3093 gene 1 U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A' (HUMAN);contains MER22 repetitive element ;. [20] X73478 X73478 Hsa.2968 gene 1 H.sapiens hPTPA mRNA. [21] X63469 X63469 Hsa.3061 gene 1 TRANSCRIPTION INITIATION FACTOR IIE-BETA CHAIN (HUMAN);contains element MER1 repetitive element ;. [22] R75893(2) R75893 Hsa.32745 3' UTR 2a 143670 PROBABLE G PROTEIN-COUPLED RECEPTOR 6H1 FROM T-CELLS (Gallus gallus) [23] U22431 U22431 Hsa.3223 gene 1 "Human hypoxia-inducible factor 1 alpha (HIF-1 alpha) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 11 # of genes = 29 -------------------------- [1] X62153 X62153 Hsa.2917 gene 1 H.sapiens mRNA for P1 protein (P1.h). [2] X02875 X02875 Hsa.3299 gene 1 "Human mRNA (3'-fragment) for (2'-5') oligo A synthetase E (1,8 kb RNA). " [3] R72374 R72374 Hsa.31943 3' UTR 2a 155897 "CALPAIN I, LARGE (Oryctolagus cuniculus) " [4] Z48541 Z48541 Hsa.28914 gene 1 H.sapiens mRNA for protein tyrosine phosphatase. [5] T60318 T60318 Hsa.3194 3' UTR 1 78472 A42811 INITIATION FACTOR EIF-4A HOMOLOG - ;. [6] H43663 H43663 Hsa.36938 3' UTR 2a 188406 TEASHIRT PROTEIN (Drosophila melanogaster) [7] H46136 H46136 Hsa.37058 3' UTR 2a 177791 HOMEOBOX PROTEIN HOX-A10 (Homo sapiens) [8] U09413 U09413 Hsa.359 gene 1 "Human zinc finger protein ZNF135 mRNA, complete cds. " [9] H11272 H11272 Hsa.34384 3' UTR 2a 47327 COMPLEMENT C9 (Oncorhynchus mykiss) [10] H45781 H45781 Hsa.37038 3' UTR 2a 188277 [11] X66839 X66839 Hsa.2856 gene 1 H.sapiens MaTu MN mRNA for p54/58N protein. [12] R23176 R23176 Hsa.3940 3' UTR 2a 131348 AMYLOID-LIKE PROTEIN 2 PRECURSOR (Homo sapiens) [13] X13451 X13451 Hsa.3298 gene 1 Human mRNA for lymphocyte lineage-restricted mb-1 membrane glycoprotein C-term. (m-mb-1 homolog.). [14] X80910 X80910 Hsa.2955 gene 1 H.sapiens PPP1CB mRNA. [15] M95627 M95627 Hsa.3212 gene 1 "Homo sapiens angio-associated migratory cell protein (AAMP) mRNA, complete cds. " [16] H40137 H40137 Hsa.37541 3' UTR 2a 191720 IRON-RESPONSIVE ELEMENT BINDING PROTEIN (Homo sapiens) [17] R97912 R97912 Hsa.39753 3' UTR 2a 200181 SERINE/THREONINE-PROTEIN KINASE IPL1 (Saccharomyces cerevisiae) [18] H47650 H47650 Hsa.37818 3' UTR 2a 193667 "PTS SYSTEM, SUCROSE-SPECIFIC IIABC COMPONENT (Pediococcus pentosaceus) " [19] R76863 R76863 Hsa.32865 3' UTR 2a 143949 DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (Caenorhabditis elegans) [20] U35116 U35116 Hsa.3867 gene 1 "Human ubiquitin isopeptidase T mRNA, complete cds. " [21] X80497 X80497 Hsa.3269 gene 1 H.sapiens PHKLA mRNA. [22] X12791 X12791 Hsa.2997 gene 1 Human mRNA for 19kD protein of signal recognition particle (SRP). [23] U03090 U03090 Hsa.290 gene 1 "Human Ca2+-dependent phospholipase A2 mRNA, complete cds. " [24] H42127 H42127 Hsa.33338 3' UTR 2a 182397 PEANUT PROTEIN (Drosophila melanogaster) [25] R72644 R72644 Hsa.32535 3' UTR 2a 156489 CHOLINE KINASE (Homo sapiens) [26] H05814 H05814 Hsa.33967 3' UTR 2a 44151 PUTATIVE ATP-DEPENDENT RNA HELICASE C06E1.10 IN CHROMOSOME III (Caenorhabditis elegans) [27] H28704 H28704 Hsa.29940 3' UTR 2a 49974 RETINOIC ACID RECEPTOR RXR-BETA ISOFORM 1 (Homo sapiens) [28] X63629 X63629 Hsa.2928 gene 1 H.sapiens mRNA for p cadherin. [29] V00520 V00520 Hsa.41108 gene 1 Human germ line gene for growth hormone (presomatotropin). ------------------------------------------------------------ clusterID = 12 # of genes = 1 -------------------------- [1] R80427 R80427 Hsa.33268 3' UTR 2a 147223 C4-DICARBOXYLATE TRANSPORT SENSOR PROTEIN DCTB (Rhizobium leguminosarum) ------------------------------------------------------------ clusterID = 13 # of genes = 18 -------------------------- [1] J02763 J02763 Hsa.6080 gene 1 "Human calcyclin gene, complete cds. " [2] T95018 T95018 Hsa.4689 3' UTR 2a 120032 40S RIBOSOMAL PROTEIN S18 (Homo sapiens) [3] T61609 T61609 Hsa.878 3' UTR 1 78081 LAMININ RECEPTOR (HUMAN);. [4] T57619 T57619 Hsa.8068 3' UTR 2a 75437 40S RIBOSOMAL PROTEIN S6 (Nicotiana tabacum) [5] T58861 T58861 Hsa.5398 3' UTR 2a 77563 60S RIBOSOMAL PROTEIN L30E (Kluyveromyces lactis) [6] control(5) control UMGAP [7] control(6) control UMGAP [8] control(7) control UMGAP [9] control(8) control UMGAP [10] R01182 R01182 Hsa.5363 3' UTR 1 123748 60S RIBOSOMAL PROTEIN L38 (HUMAN);. [11] T48804 T48804 Hsa.5444 3' UTR 1 70269 40S RIBOSOMAL PROTEIN S24 (HUMAN). [12] T72938 T72938 Hsa.954 3' UTR 1 84350 QM PROTEIN (HUMAN);. [13] T47144 T47144 Hsa.489 3' UTR 1 74837 JN0549 RIBOSOMAL PROTEIN YL30. [14] R85464 R85464 Hsa.73 3' UTR 1 179999 ATP SYNTHASE LIPID-BINDING PROTEIN P2 PRECURSOR (HUMAN);. [15] T62856 T62856 Hsa.537 3' UTR 1 79571 P09895 60S RIBOSOMAL PROTEIN ;. [16] M16937 M16937 Hsa.823 gene 1 "Human homeo box c1 protein, mRNA, complete cds. " [17] U26401 U26401 Hsa.41279 gene 1 "Human galactokinase (galK) mRNA, complete cds. " [18] L09604 L09604 Hsa.562 gene 1 INTESTINAL MEMBRANE A4 PROTEIN (HUMAN);. ------------------------------------------------------------ clusterID = 14 # of genes = 38 -------------------------- [1] R78934 R78934 Hsa.10755 3' UTR 2a 146232 ENDOTHELIAL ACTIN-BINDING PROTEIN (Homo sapiens) [2] H82746 H82746 Hsa.1070 3' UTR 1 249172 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C (HUMAN);. [3] L26405(1) L26405 Hsa.1719 gene 1 "Homo sapiens (huc) mRNA, complete cds. " [4] T91043 T91043 Hsa.17256 3' UTR 2a 112500 TYROSINE-PROTEIN KINASE RECEPTOR UFO PRECURSOR (Homo sapiens) [5] Z11692 Z11692 Hsa.1166 gene 1 H.sapiens mRNA for elongation factor 2. [6] M69238 M69238 Hsa.1263 gene 1 "Human aryl hydrocarbon receptor nuclear translocator (ARNT) mRNA, complete cds. " [7] T59406 T59406 Hsa.11352 3' UTR 2a 75852 LYMPHOID ENHANCER BINDING FACTOR 1 (Mus musculus) [8] D13315(1) D13315 Hsa.103 gene 1 LACTOYLGLUTATHIONE LYASE (HUMAN);contains Alu repetitive element;. [9] U05681 U05681 Hsa.1276 gene 1 "Human proto-oncogene (BCL3) gene, exons 3-9 and complete cds. " [10] T72503 T72503 Hsa.153 3' UTR 1 82534 60S RIBOSOMAL PROTEIN L7 (HUMAN);. [11] T70197 T70197 Hsa.13007 3' UTR 2a 81043 RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 (Homo sapiens) [12] T72403 T72403 Hsa.13110 3' UTR 2a 86225 "HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ(3) ALPHA CHAIN PRECURSOR (Homo sapiens) " [13] T64941 T64941 Hsa.13670 3' UTR 2a 66800 SERINE PROTEASE HEPSIN (Homo sapiens) [14] M94250 M94250 Hsa.1678 gene 1 "Human retinoic acid inducible factor (MK) gene exons 1-5, complete cds. " [15] L36844 L36844 Hsa.1164 gene 1 "Homo sapiens (clone p15INK4B/HA5) CDK inhibitory protein mRNA, complete cds. " [16] R54854 R54854 Hsa.11765 3' UTR 2a 154475 VON WILLEBRAND FACTOR PRECURSOR (Homo sapiens) [17] M91670 M91670 Hsa.1668 gene 1 "Human ubiquitin carrier protein (E2-EPF) mRNA, complete cds. " [18] M57298 M57298 Hsa.1486 gene 1 "Human GTP-binding protein G25K mRNA, complete cds. " [19] T69271 T69271 Hsa.12892 3' UTR 2a 82871 SEX HORMONE-BINDING GLOBULIN PRECURSOR (Homo sapiens) [20] M34192(1) M34192 Hsa.1522 gene 1 ISOVALERYL-COA DEHYDROGENASE PRECURSOR (HUMAN);contains MER22 repetitive element ;. [21] T89164 T89164 Hsa.12024 3' UTR 2a 109993 HYPOTHETICAL 18.8 KD PROTEIN ZK637.14 IN CHROMOSOME III (Caenorhabditis elegans) [22] R70008 R70008 Hsa.10171 3' UTR 2a 142450 VASCULAR ENDOTHELIAL GROWTH FACTOR PRECURSOR (Rattus norvegicus) [23] T59354 T59354 Hsa.11340 3' UTR 2a 75292 EBNA-2 NUCLEAR PROTEIN (Epstein-barr virus) [24] H26419 H26419 Hsa.1259 3' UTR 1 162182 APOLIPOPROTEIN D PRECURSOR (HUMAN);. [25] L03840 L03840 Hsa.1433 gene 1 "Human fibroblast growth factor receptor 4 (FGFR4) mRNA, complete cds. " [26] H09149 H09149 Hsa.13023 3' UTR 2a 46513 ASIALOGLYCOPROTEIN RECEPTOR R2/3 (Rattus norvegicus) [27] H11719 H11719 Hsa.1317 3' UTR 1 47679 MONOCYTE DIFFERENTIATION ANTIGEN CD14 PRECURSOR (HUMAN);. [28] L27670 L27670 Hsa.1798 gene 1 "Human Landsteiner-Wiener blood group glycoprotein (LW) mRNA, complete cds. " [29] R38513(2) R38513 Hsa.16742 3' UTR 2a 26871 FIBROBLAST GROWTH FACTOR RECEPTOR 2 PRECURSOR (Homo sapiens) [30] T72599 T72599 Hsa.13610 3' UTR 2a 22159 PROBABLE NUCLEAR ANTIGEN (Pseudorabies virus) [31] M65105 M65105 Hsa.1860 gene 1 SODIUM-DEPENDENT NORADRENALINE TRANSPORTER (HUMAN);contains Alu repetitive element;. [32] M22488 M22488 Hsa.1283 gene 1 Human bone morphogenetic protein 1 (BMP-1) mRNA. [33] D13315(2) D13315 Hsa.103 gene 1 LACTOYLGLUTATHIONE LYASE (HUMAN);contains Alu repetitive element;. [34] T64885 T64885 Hsa.13628 3' UTR 2a 66711 GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 1 (Saccharomyces cerevisiae) [35] T52905 T52905 Hsa.10240 3' UTR 2a 68116 "NEURONAL ACETYLCHOLINE RECEPTOR PROTEIN, ALPHA-2 CHAIN PRECURSOR (Gallus gallus) " [36] L26405(2) L26405 Hsa.1719 gene 1 "Homo sapiens (huc) mRNA, complete cds. " [37] T85165 T85165 Hsa.16714 3' UTR 2a 111345 SRC SUBSTRATE P80/85 PROTEINS (Gallus gallus) [38] R74066 R74066 Hsa.10659 3' UTR 2a 156919 DNA DAMAGE RESPONSE PROTEIN KINASE DUN1 (Saccharomyces cerevisiae) ------------------------------------------------------------ clusterID = 15 # of genes = 2 -------------------------- [1] T56604 T56604 Hsa.6472 3' UTR 2a 73143 TUBULIN BETA CHAIN (Haliotis discus) [2] M85079 M85079 Hsa.2058 gene 1 "Human TGF-beta type II receptor mRNA, complete cds. " ------------------------------------------------------------ clusterID = 16 # of genes = 3 -------------------------- [1] X67325(1) X67325 Hsa.2918 gene 1 H.sapiens p27 mRNA. [2] X02492 X02492 Hsa.3353 gene 1 INTERFERON-INDUCED PROTEIN 6-16 PRECURSOR (HUMAN);contains L1 repetitive element ;. [3] X67325(2) X67325 Hsa.2918 gene 1 H.sapiens p27 mRNA. ------------------------------------------------------------ clusterID = 17 # of genes = 6 -------------------------- [1] T64974 T64974 Hsa.8301 3' UTR 2a 66833 BETA-3 ADRENERGIC RECEPTOR (Homo sapiens) [2] H92195 H92195 Hsa.33144 3' UTR 2a 221798 EBV-INDUCED G PROTEIN-COUPLED RECEPTOR 1 PRECURSOR (Homo sapiens) [3] X59842 X59842 Hsa.2926 gene 1 Human PBX2 mRNA. [4] H28050 H28050 Hsa.36025 3' UTR 2a 182000 FK506-BINDING PROTEIN PRECURSOR (Mus musculus) [5] R73606 R73606 Hsa.3954 3' UTR 2a 141558 "5'-AMP-ACTIVATED PROTEIN KINASE, GAMMA CHAIN (Rattus norvegicus) " [6] H13292 H13292 Hsa.9340 3' UTR 2a 148374 RNA-BINDING PROTEIN FUS/TLS (Homo sapiens) ------------------------------------------------------------ clusterID = 18 # of genes = 3 -------------------------- [1] X75208 X75208 Hsa.2967 gene 1 H.sapiens HEK2 mRNA for protein tyrosine kinase receptor. [2] K03474(1) K03474 Hsa.41098 gene 1 "Human Mullerian inhibiting substance gene, complete cds. " [3] K03474(2) K03474 Hsa.41098 gene 1 "Human Mullerian inhibiting substance gene, complete cds. " ------------------------------------------------------------ clusterID = 19 # of genes = 35 -------------------------- [1] T62878 T62878 Hsa.689 3' UTR 1 79597 CYTOCHROME C OXIDASE POLYPEPTIDE IV PRECURSOR (HUMAN);. [2] T93589 T93589 Hsa.4316 3' UTR 2a 118042 TUBULIN ALPHA-6 CHAIN (Mus musculus) [3] M14200(1) M14200 Hsa.733 gene 1 "Human diazepam binding inhibitor (DBI) mRNA, complete cds. " [4] Z48950 Z48950 Hsa.6146 gene 1 H.sapiens hH3.3B gene for histone H3.3. [5] L12168 L12168 Hsa.570 gene 1 "Homo sapiens adenylyl cyclase-associated protein (CAP) mRNA, complete cds. " [6] R21547 R21547 Hsa.7498 3' UTR 2a 130227 TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0 (Bovine herpesvirus type 1) [7] T51613 T51613 Hsa.921 3' UTR 1 72433 UBIQUINOL-CYTOCHROME C REDUCTASE 11 KD PROTEIN (HUMAN). [8] R00282 R00282 Hsa.5537 3' UTR 2a 123276 GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) GAMMA-7 SUBUNIT (Bos taurus) [9] R61359 R61359 Hsa.6633 3' UTR 2a 37866 BASIGIN PRECURSOR (Gallus gallus) [10] D00761 D00761 Hsa.59 gene 1 PROTEASOME COMPONENT C5 (HUMAN);. [11] H77348 H77348 Hsa.41875 3' UTR 2a 233563 5-LIPOXYGENASE ACTIVATING PROTEIN (Macaca mulatta) [12] T51499 T51499 Hsa.470 3' UTR 1 71494 A42792 SUCCINATE DEHYDROGENASE. [13] H17897 H17897 Hsa.608 3' UTR 1 50396 "ADP,ATP CARRIER PROTEIN, FIBROBLAST ISOFORM (HUMAN);. " [14] T51250 T51250 Hsa.5402 3' UTR 1 70115 CYTOCHROME C OXIDASE POLYPEPTIDE VIII-LIVER/HEART (HUMAN). [15] M14200(2) M14200 Hsa.733 gene 1 "Human diazepam binding inhibitor (DBI) mRNA, complete cds. " [16] T65438 T65438 Hsa.4251 3' UTR 2a 21650 PRE-MRNA SPLICING FACTOR SRP20 (Homo sapiens) [17] H09137 H09137 Hsa.688 3' UTR 1 46399 UBIQUINOL-CYTOCHROME C REDUCTASE CORE PROTEIN 2 PRECURSOR (HUMAN);. [18] L07395 L07395 Hsa.428 gene 1 PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT (HUMAN);. [19] H89477 H89477 Hsa.45732 3' UTR 2a 240171 G1/S-SPECIFIC CYCLIN D3 (Homo sapiens) [20] M22632 M22632 Hsa.602 gene 1 "Human mitochondrial aspartate aminotransferase mRNA, complete cds. " [21] T70062 T70062 Hsa.490 3' UTR 1 80945 "Human nuclear factor NF45 mRNA, complete cds. " [22] Z18538 Z18538 Hsa.41208 gene 1 H.sapiens encoding skin-derived antileukoproteinase. [23] T40849 T40849 Hsa.440 3' UTR 1 61286 "P12805 G10 ,. " [24] R93337 R93337 Hsa.8833 3' UTR 2a 275889 HOMEOTIC GENE REGULATOR (Drosophila melanogaster) [25] M61199 M61199 Hsa.694 gene 1 "Human cleavage signal 1 protein mRNA, complete cds. " [26] R55310 R55310 Hsa.442 3' UTR 1 154810 S36390 MITOCHONDRIAL PROCESSING PEPTIDASE ;. [27] D78152 D78152 Hsa.975 gene 1 Human mRNA for annexin IV (carbohydrate-binding protein p33/41). [28] T84481 T84481 Hsa.7459 3' UTR 2a 111401 PHOSPHORYLASE B KINASE BETA REGULATORY CHAIN (Oryctolagus cuniculus) [29] L25616 L25616 Hsa.667 gene 1 "Human CG1 protein mRNA, complete cds. " [30] U24166 U24166 Hsa.7462 gene 1 "Human EB1 mRNA, complete cds. " [31] M74524 M74524 Hsa.814 gene 1 "Human HHR6A (yeast RAD 6 homologue) mRNA, complete cds. " [32] M77477 M77477 Hsa.578 gene 1 "Human aldehyde dehydrogenase mRNA, complete cds. " [33] D10523 D10523 Hsa.481 gene 1 "Human mRNA for 2-oxoglutarate dehydrogenase, complete cds. " [34] X73424 X73424 Hsa.41239 gene 1 PROPIONYL-COA CARBOXYLASE BETA CHAIN (HUMAN);. [35] H88876 H88876 Hsa.45658 3' UTR 2a 253168 CD9 ANTIGEN (Homo sapiens) ------------------------------------------------------------ clusterID = 20 # of genes = 7 -------------------------- [1] M76378(1) M76378 Hsa.692 gene 1 "Human cysteine-rich protein (CRP) gene, exons 5 and 6. " [2] M63391 M63391 Hsa.8147 gene 1 "Human desmin gene, complete cds. " [3] M76378(2) M76378 Hsa.692 gene 1 "Human cysteine-rich protein (CRP) gene, exons 5 and 6. " [4] R87126 R87126 Hsa.37937 3' UTR 2a 197371 "MYOSIN HEAVY CHAIN, NONMUSCLE (Gallus gallus) " [5] M76378(3) M76378 Hsa.692 gene 1 "Human cysteine-rich protein (CRP) gene, exons 5 and 6. " [6] L05144 L05144 Hsa.1902 gene 1 "PHOSPHOENOLPYRUVATE CARBOXYKINASE, CYTOSOLIC (HUMAN);contains Alu repetitive element;contains element PTR5 repetitive element ;. " [7] J02854 J02854 Hsa.1832 gene 1 "MYOSIN REGULATORY LIGHT CHAIN 2, SMOOTH MUSCLE ISOFORM (HUMAN);contains element TAR1 repetitive element ;. " ------------------------------------------------------------ clusterID = 21 # of genes = 1 -------------------------- [1] R99907 R99907 Hsa.8192 3' UTR 2a 201673 INTERFERON REGULATORY FACTOR 2 (Homo sapiens) ------------------------------------------------------------ clusterID = 22 # of genes = 3 -------------------------- [1] T62972 T62972 Hsa.285 3' UTR 1 80738 P02403 60S RIBOSOMAL PROTEIN ;. [2] X02761 X02761 Hsa.2706 gene 1 Human mRNA for fibronectin (FN precursor). [3] X60489 X60489 Hsa.2688 gene 1 Human mRNA for elongation factor-1-beta. ------------------------------------------------------------ clusterID = 23 # of genes = 14 -------------------------- [1] M33680 M33680 Hsa.1098 gene 1 "Human 26-kDa cell surface protein TAPA-1 mRNA, complete cds. " [2] U13896 U13896 Hsa.1175 gene 1 "Human homolog of Drosophila discs large protein, isoform 2 (hdlg-2) mRNA, complete cds. " [3] T48939 T48939 Hsa.1071 3' UTR 1 70496 yb07e05.s1 Homo sapiens cDNA clone 70496 3' contains MER22 repetitive element. [4] M87503 M87503 Hsa.1724 gene 1 TRANSCRIPTIONAL REGULATOR ISGF3 GAMMA SUBUNIT (HUMAN);. [5] L13939 L13939 Hsa.1642 gene 1 "Human beta adaptin protein mRNA, complete cds. " [6] M14764(1) M14764 Hsa.1855 gene 1 LOW-AFFINITY NERVE GROWTH FACTOR RECEPTOR PRECURSOR (HUMAN);. [7] M80613 M80613 Hsa.1554 gene 1 "Human homolog of Drosophila female sterile homeotic mRNA, complete cds. " [8] M98343 M98343 Hsa.1672 gene 1 "Homo sapiens amplaxin (EMS1) mRNA, complete cds. " [9] D43951 D43951 Hsa.1618 gene 1 "Human mRNA (KIAA0099) for ORF (fruit fly pumilio gene-related), complete cds. " [10] T52624 T52624 Hsa.10169 3' UTR 1 67178 H.sapiens mRNA for processing a-glucosidase I. [11] M32315 M32315 Hsa.1122 gene 1 TUMOR NECROSIS FACTOR RECEPTOR 2 PRECURSOR (HUMAN);contains THR.t3 THR repetitive element ;. [12] L36818 L36818 Hsa.1163 gene 1 "Human (clone 51C-3) 51C protein mRNA, complete cds. " [13] M85169 M85169 Hsa.1057 gene 1 "Human homologue of yeast sec7 mRNA, complete cds. " [14] X89985 X89985 Hsa.17514 gene 1 H.sapiens mRNA for BCL7B protein. ------------------------------------------------------------ clusterID = 24 # of genes = 18 -------------------------- [1] T73092 T73092 Hsa.9251 3' UTR 2a 85983 EUKARYOTIC INITIATION FACTOR 4A-I (Homo sapiens) [2] R39130 R39130 Hsa.964 3' UTR 1 26585 S27965 HYPOTHETICAL PROTEIN - ;. [3] R01755 R01755 Hsa.7852 3' UTR 2a 124172 TRANSTHYRETIN PRECURSOR (Homo sapiens) [4] R46069 R46069 Hsa.7554 3' UTR 2a 35925 MEROZOITE SURFACE ANTIGENS PRECURSOR (Plasmodium falciparum) [5] X90529 X90529 Hsa.8232 gene 1 H.sapiens mRNA for ragA protein. [6] L08069 L08069 Hsa.94 gene 1 "Human heat shock protein, E. coli DnaJ homologue mRNA, complete cds. " [7] D31716 D31716 Hsa.41338 gene 1 "Human mRNA for GC box bindig protein, complete cds. " [8] T50508 T50508 Hsa.9872 3' UTR 2a 77141 TRANSCRIPTION INITIATION PROTEIN SPT4 (Saccharomyces cerevisiae) [9] R42798 R42798 Hsa.904 3' UTR 1 32327 A34421 MALE-ENHANCED ANTIGEN - ;. [10] R44740 R44740 Hsa.7348 3' UTR 2a 33826 DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1 (Xenopus laevis) [11] D00762 D00762 Hsa.60 gene 1 PROTEASOME COMPONENT C8 (HUMAN);. [12] J03239 J03239 Hsa.728 gene 1 "Human c-erbA-alpha-2 gene encoding thyroid hormone receptor type alpha-2 mRNA, complete cds, clone hTR-alpha-2. " [13] L11373 L11373 Hsa.981 gene 1 "Human protocadherin 43 mRNA, complete cds for abbreviated PC43. " [14] M94203 M94203 Hsa.902 gene 1 "Homo sapiens protein kinase gene, 3' end of cds and trinucleotide repeat region. " [15] M32313 M32313 Hsa.555 gene 1 "Human steroid 5-alpha-reductase mRNA, complete cds. " [16] U20141 U20141 Hsa.952 gene 1 "Human inducible nitric oxide synthase mRNA, complete cds. " [17] R96070 R96070 Hsa.4296 3' UTR 2a 230955 DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN DRG (Mus musculus) [18] L47162 L47162 Hsa.41368 gene 1 "Human fatty aldehyde dehydrogenase (FALDH) mRNA, complete cds. " ------------------------------------------------------------ clusterID = 25 # of genes = 1 -------------------------- [1] T47377 T47377 Hsa.3016 3' UTR 1 71035 S-100P PROTEIN (HUMAN). ------------------------------------------------------------ clusterID = 26 # of genes = 24 -------------------------- [1] D14812 D14812 Hsa.2487 gene 1 "Human mRNA for ORF, complete cds. " [2] R01157 R01157 Hsa.20524 3' UTR 2a 124858 "HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, C-4 ALPHA CHAIN (Homo sapiens) " [3] R33367 R33367 Hsa.26528 3' UTR 2a 135815 MEMBRANE COFACTOR PROTEIN PRECURSOR (Homo sapiens) [4] M14016 M14016 Hsa.2089 gene 1 UROPORPHYRINOGEN DECARBOXYLASE (HUMAN);contains element PTR5 repetitive element ;. [5] L10413 L10413 Hsa.275 gene 1 "Human farnesyltransferase alpha-subunit mRNA, complete cds. " [6] X63071 X63071 Hsa.2274 gene 1 H.sapiens mRNA for novel DNA binding protein. [7] R20554 R20554 Hsa.2157 3' UTR 1 26366 PROBABLE PROTEIN DISULFIDE ISOMERASE ER-60 PRECURSOR (HUMAN);. [8] U10117(1) U10117 Hsa.2152 gene 1 "Human endothelial-monocyte activating polypeptide II mRNA, complete cds. " [9] Z23064 Z23064 Hsa.2777 gene 1 H.sapiens mRNA gene for hnRNP G protein. [10] U10117(2) U10117 Hsa.2152 gene 1 "Human endothelial-monocyte activating polypeptide II mRNA, complete cds. " [11] X78549 X78549 Hsa.2609 gene 1 H.sapiens brk mRNA for tyrosine kinase. [12] U04953 U04953 Hsa.229 gene 1 "Human isoleucyl-tRNA synthetase mRNA, complete cds. " [13] X17644 X17644 Hsa.2756 gene 1 Human GST1-Hs mRNA for GTP-binding protein. [14] U22055 U22055 Hsa.2451 gene 1 "Human 100 kDa coactivator mRNA, complete cds. " [15] H47107 H47107 Hsa.22242 3' UTR 2a 193455 MITOCHONDRIAL PROTEIN IMPORT PROTEIN 2 (Saccharomyces cerevisiae) [16] R48303 R48303 Hsa.27537 3' UTR 2a 153505 TYROSINE RICH ACIDIC MATRIX PROTEIN (Bos taurus) [17] U13991 U13991 Hsa.2154 gene 1 "Human TATA-binding protein associated factor 30 kDa subunit (tafII30) mRNA, complete cds. " [18] R94513 R94513 sa.19001 3' UTR 2a 197667 SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 2 (Homo sapiens) [19] L27841 L27841 Hsa.1917 gene 1 "Human autoantigen pericentriol material 1 (PCM-1) mRNA, complete cds. " [20] R71585 R71585 Hsa.20376 3' UTR 2a 142870 EBNA-2 NUCLEAR PROTEIN (Epstein-barr virus) [21] U18299 U18299 Hsa.2199 gene 1 "Human damage-specific DNA binding protein DDBa p127 subunit (DDB1) mRNA, complete cds. " [22] R49719 R49719 Hsa.24490 3' UTR 2a 38755 GAMMA-AMINOBUTYRIC-ACID RECEPTOR BETA-4 SUBUNIT PRECURSOR (Gallus gallus) [23] M58050 M58050 Hsa.2196 gene 1 "Human membrane cofactor protein (MCP) mRNA, complete cds. " [24] X56597 X56597 Hsa.2705 gene 1 Human humFib mRNA for fibrillarin. ------------------------------------------------------------ clusterID = 27 # of genes = 2 -------------------------- [1] X86693 X86693 Hsa.2344 gene 1 H.sapiens mRNA for hevin like protein. [2] H06524 H06524 Hsa.2291 3' UTR 1 44386 "GELSOLIN PRECURSOR, PLASMA (HUMAN);. " ------------------------------------------------------------ clusterID = 28 # of genes = 11 -------------------------- [1] Z29677 Z29677 Hsa.3010 gene 1 H.sapiens mRNA for ras-related GTP-binding protein. [2] D17400 D17400 Hsa.367 gene 1 "Human mRNA for 6-pyruvoyl-tetrahydropterin synthase, complete cds. " [3] H10925 H10925 Hsa.34510 3' UTR 2a 47022 PIM-1 PROTO-ONCOGENE SERINE/THREONINE-PROTEIN KINASE (Mus musculus) [4] Z29505 Z29505 Hsa.2904 gene 1 H.sapiens mRNA for nucleic acid binding protein sub2.3. [5] U26312 U26312 Hsa.3263 gene 1 "Human heterochromatin protein HP1Hs-gamma mRNA, partial cds. " [6] R11485 R11485 Hsa.2867 3' UTR 1 128156 PROTEASOME ZETA CHAIN (HUMAN);. [7] Z25521 Z25521 Hsa.2818 gene 1 "H.sapiens integrin associated protein mRNA, complete CDS,. " [8] U28686 U28686 Hsa.3230 gene 1 "Human putative RNA binding protein RNPL mRNA, complete cds. " [9] D00596 D00596 Hsa.3083 gene 1 "Human thymidylate syntase (EC 2.1.1.45) gene, complete cds. " [10] X53586 X53586 Hsa.2821 gene 1 Human mRNA for integrin alpha 6. [11] R59583 R59583 Hsa.28784 3' UTR 2a 41999 PRE-MRNA SPLICING FACTOR SRP75 (Homo sapiens) ------------------------------------------------------------ clusterID = 29 # of genes = 7 -------------------------- [1] T49941 T49941 Hsa.8831 3' UTR 1 69828 PUTATIVE INSULIN-LIKE GROWTH FACTOR II ASSOCIATED (HUMAN). [2] T51852 T51852 Hsa.2095 3' UTR 1 75026 VIMENTIN (HUMAN). [3] J03040 J03040 Hsa.2014 gene 1 SPARC PRECURSOR (HUMAN);contains MSR1 repetitive element ;. [4] H41129 H41129 Hsa.879 3' UTR 1 175539 GALECTIN-1 (HUMAN);contains Alu repetitive element;. [5] U21128 U21128 Hsa.2135 gene 1 "Human lumican mRNA, complete cds. " [6] J03210 J03210 Hsa.680 gene 1 "Human collagenase type IV mRNA, 3' end. " [7] T95046 T95046 Hsa.6484 3' UTR 2a 120085 PROTEASE DO PRECURSOR (Escherichia coli) ------------------------------------------------------------ clusterID = 30 # of genes = 4 -------------------------- [1] control(9) control i [2] control(10) control i [3] control(11) control i [4] control(12) control i ------------------------------------------------------------ clusterID = 31 # of genes = 1 -------------------------- [1] H11125 H11125 Hsa.8121 3' UTR 2a 48206 G1/S-SPECIFIC CYCLIN D2 (Homo sapiens) ------------------------------------------------------------ clusterID = 32 # of genes = 1 -------------------------- [1] R89823 R89823 Hsa.38171 3' UTR 2a 194668 INORGANIC PYROPHOSPHATASE (Bos taurus) ------------------------------------------------------------ clusterID = 33 # of genes = 38 -------------------------- [1] X51346 X51346 Hsa.2831 gene 1 Human jun-D mRNA for JUN-D protein. [2] H28452 H28452 Hsa.36074 3' UTR 2a 181783 BRAIN CALCIUM CHANNEL BI-2 PROTEIN (Oryctolagus cuniculus) [3] D30655 D30655 Hsa.338 gene 1 Human mRNA for eukaryotic initiation factor 4AII. [4] M22806 M22806 Hsa.3295 gene 1 "Human prolyl 4-hydroxylase beta-subunit and disulfide isomerase (P4HB) gene, exon 11, clones 6B-(1,3,5,6). " [5] R92729(1) R92729 Hsa.38375 3' UTR 2a 195957 X BOX BINDING PROTEIN-1 (Homo sapiens) [6] R95874 R95874 Hsa.39432 3' UTR 2a 199264 RETROVIRUS-RELATED ENV POLYPROTEIN (Homo sapiens) [7] X57206 X57206 Hsa.2829 gene 1 H.sapiens mRNA for 1D-myo-inositol-trisphosphate 3-kinase B isoenzyme. [8] Z11584 Z11584 Hsa.2905 gene 1 H.sapiens mRNA for NuMA protein. [9] U28963 U28963 Hsa.3307 gene 1 "Human Gps2 (GPS2) mRNA, complete cds. " [10] X72389 X72389 Hsa.2952 gene 1 H.sapiens mRNA for 4-hydroxyphenylpyruvate dioxygenase. [11] R56070 R56070 Hsa.28145 3' UTR 2a 40682 PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE 45 KD SUBUNIT (Homo sapiens) [12] R49855 R49855 Hsa.3852 3' UTR 2a 152637 COAGULATION FACTOR V PRECURSOR (Homo sapiens) [13] M37984(1) M37984 Hsa.3069 gene 1 "Human slow twitch skeletal muscle/cardiac muscle troponin C gene, complete cds. " [14] H17108 H17108 Hsa.35000 3' UTR 2a 50959 GTP-BINDING PROTEIN HFLX (Escherichia coli) [15] Z49199 Z49199 Hsa.3185 gene 1 H.sapiens mRNA for RNA polymerase II subunit hRPB17. [16] U30827 U30827 Hsa.3454 gene 1 "Human splicing factor SRp40-3 (SRp40) mRNA, complete cds. " [17] D31883(2) D31883 Hsa.3150 gene 1 "Human mRNA (KIAA0059) for ORF (related to actin bundling protein dematn), complete cds. " [18] R94588 R94588 Hsa.39288 3' UTR 2a 276282 CELL DIVISION PROTEIN KINASE 2 (HUMAN);. [19] X68148 X68148 Hsa.3022 gene 1 H.sapiens SHC mRNA. [20] D25216 D25216 Hsa.3159 gene 1 "Human mRNA (KIAA0014) for ORF, complete cds. " [21] R92729(2) R92729 Hsa.38375 3' UTR 2a 195957 X BOX BINDING PROTEIN-1 (Homo sapiens) [22] U18920 U18920 Hsa.3260 gene 1 "Human chromosome 17q12-21 mRNA, clone pOV-3, partial cds. " [23] U01877 U01877 Hsa.370 gene 1 "Human p300 protein mRNA, complete cds. " [24] T78104 T78104 Hsa.3239 3' UTR 1 114499 "Human proline- arginine-rich end leucine-rich repeat protein PRELP mRNA, complete cds. " [25] L41268 L41268 Hsa.3274 gene 1 "Homo sapiens natural killer-associated transcript 2 (NKAT2) mRNA, complete cds. " [26] X74874 X74874 Hsa.2999 gene 1 "H.sapiens gene for RNA pol II largest subunit, exon 1. " [27] T49637 T49637 Hsa.3145 3' UTR 1 67743 "Human mRNA (KIAA0064) for ORF (novel protein), complete cds. " [28] H05910 H05910 Hsa.28186 3' UTR 2a 43545 [29] R99230 R99230 Hsa.2925 3' UTR 1 200611 PORPHOBILINOGEN DEAMINASE (HUMAN);. [30] X64037 X64037 Hsa.2978 gene 1 H.sapiens mRNA for RNA polymerase II associated protein RAP74. [31] H04311 H04311 Hsa.28146 3' UTR 2a 149277 RAS GTPASE-ACTIVATING-LIKE PROTEIN IQGAP1 (Homo sapiens) [32] R54467 R54467 Hsa.27930 3' UTR 2a 39602 STEROID RECEPTOR TR2 (Homo sapiens) [33] T56475 T56475 Hsa.3967 3' UTR 2a 72983 CUT9 PROTEIN (Schizosaccharomyces pombe) [34] H27277 H27277 Hsa.35968 3' UTR 2a 158402 HOMEOBOX PROTEIN HOX-A4 (Homo sapiens) [35] R70253 R70253 Hsa.32319 3' UTR 2a 155165 GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR RALGDSA (Mus musculus) [36] T79473 T79473 Hsa.2956 3' UTR 1 114097 PROTEIN PHOSPHATASE PP-X (HUMAN);. [37] U21049 U21049 Hsa.41187 gene 1 "Human DD96 mRNA, complete cds. " [38] X82166 X82166 Hsa.401 gene 1 H.sapiens mRNA for cystathionine-beta-synthase. ------------------------------------------------------------ clusterID = 34 # of genes = 11 -------------------------- [1] R43976 R43976 Hsa.24279 3' UTR 2a 33626 COUP TRANSCRIPTION FACTOR (Homo sapiens) [2] R41866 R41866 Hsa.23249 3' UTR 2a 31854 CD81 ANTIGEN (Mus musculus) [3] X75304(1) X75304 Hsa.2530 gene 1 H.sapiens giantin mRNA. [4] R71251(1) R71251 Hsa.20609 3' UTR 2a 143073 TYPE-1A ANGIOTENSIN II RECEPTOR (Homo sapiens) [5] R71251(2) R71251 Hsa.20609 3' UTR 2a 143073 TYPE-1A ANGIOTENSIN II RECEPTOR (Homo sapiens) [6] R39599 R39599 Hsa.27300 3' UTR 2a 137625 "RYANODINE RECEPTOR, SKELETAL MUSCLE (Oryctolagus cuniculus) " [7] R45529 R45529 Hsa.25536 3' UTR 2a 35344 POTASSIUM CHANNEL PROTEIN KV2.1 (Rattus norvegicus) [8] M83221 M83221 Hsa.862 gene 1 TRANSCRIPTION FACTOR RELB (HUMAN);. [9] H05695 H05695 Hsa.25294 3' UTR 2a 43903 POSSIBLE GUSTATORY RECEPTOR CLONE PTE38 (Rattus norvegicus) [10] R36644 R36644 Hsa.25830 3' UTR 2a 136908 ACTIVIN RECEPTOR TYPE IIB PRECURSOR (Xenopus laevis) [11] Y00661 Y00661 Hsa.2602 gene 1 Human bcr mRNA (break point cluster gene). ------------------------------------------------------------ clusterID = 35 # of genes = 5 -------------------------- [1] R75843 R75843 Hsa.3803 3' UTR 2a 143567 TRANSLATIONAL INITIATION FACTOR 2 GAMMA SUBUNIT (Homo sapiens) [2] X70040 X70040 Hsa.2996 gene 1 H.sapiens RON mRNA for tyrosine kinase. [3] X54101 X54101 Hsa.2897 gene 1 NKG5 PROTEIN PRECURSOR (HUMAN);. [4] R85479 R85479 Hsa.36528 3' UTR 2a 180094 TRANSCRIPTIONAL ACTIVATOR FE65 (Rattus norvegicus) [5] H23098 H23098 Hsa.29817 3' UTR 2a 52062 CHL1 PROTEIN (Saccharomyces cerevisiae) ------------------------------------------------------------ clusterID = 36 # of genes = 23 -------------------------- [1] X79066 X79066 Hsa.7280 gene 1 H. sapiens ERF-1 mRNA 5' end. [2] H88360(2) H88360 Hsa.45604 3' UTR 2a 252849 "GUANINE NUCLEOTIDE-BINDING PROTEIN G(OLF), ALPHA SUBUNIT (Rattus norvegicus) " [3] L28010 L28010 Hsa.812 gene 1 "Homo sapiens HnRNP F protein mRNA, complete cds. " [4] T50334(1) T50334 Hsa.9817 3' UTR 2a 72201 14-3-3-LIKE PROTEIN GF14 OMEGA (Arabidopsis thaliana) [5] H20505 H20505 Hsa.4954 3' UTR 2a 173124 RAC-ALPHA SERINE/THREONINE KINASE (Homo sapiens) [6] R62425 R62425 Hsa.9277 3' UTR 2a 36222 ALBUMIN B-32 PROTEIN (Zea mays) [7] T50334(2) T50334 Hsa.9817 3' UTR 2a 72201 14-3-3-LIKE PROTEIN GF14 OMEGA (Arabidopsis thaliana) [8] U37012 U37012 Hsa.41315 gene 1 "Human cleavage and polyadenylation specificity factor mRNA, complete cds. " [9] D14520 D14520 Hsa.81 gene 1 "Human mRNA for GC-Box binding protein BTEB2, complete cds. " [10] U37408 U37408 Hsa.41347 gene 1 "Human CtBP mRNA, complete cds. " [11] M27903 M27903 Hsa.995 gene 1 "Human pim-1 proto-oncogene gene, complete cds. " [12] L39874 L39874 Hsa.714 gene 1 "Homo sapiens deoxycytidylate deaminase gene, complete cds. " [13] M74491 M74491 Hsa.591 gene 1 "Human ADP-ribosylation factor 3 mRNA, complete cds. " [14] M57567 M57567 Hsa.592 gene 1 "Human ADP-ribosylation factor (hARF5) mRNA, complete cds. " [15] R59097 R59097 Hsa.5633 3' UTR 2a 42048 TYROSINE-PROTEIN KINASE RECEPTOR TIE-1 PRECURSOR (Mus musculus) [16] U07695(1) U07695 Hsa.465 gene 1 "Human tyrosine kinase (HTK) mRNA, complete cds. " [17] U07695(2) U07695 Hsa.465 gene 1 "Human tyrosine kinase (HTK) mRNA, complete cds. " [18] H69872 H69872 Hsa.43155 3' UTR 2a 212391 "PROTEIN KINASE C, DELTA TYPE (Homo sapiens) " [19] H81864 H81864 Hsa.44686 3' UTR 2a 249332 CELL DIVISION CONTROL PROTEIN 2 HOMOLOG (Plasmodium falciparum) [20] U07695(3) U07695 Hsa.465 gene 1 "Human tyrosine kinase (HTK) mRNA, complete cds. " [21] H11054 H11054 Hsa.459 3' UTR 1 47306 "PROTEIN KINASE C, DELTA TYPE (HUMAN);. " [22] R26146 R26146 Hsa.946 3' UTR 1 133109 NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT (HUMAN);.