utcs Phylogenetics
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Datasets

Overview

This page provides links to published datasets (both empirical and simulated) that have been used to test methods for tasks involved in estimating very large phylogenetic trees and alignments from molecular sequences. If you are interested in contributing to this resource, please send email to Tandy Warnow at tandy@cs.utexas.edu.

Empirical Datasets for Testing Optimization-Based Methods

datasets for estimating trees from sequence alignments of empirical data, with ML and MP scores of estimated trees

Empirical Datasets with Reference Topologies

datasets for estimating trees from sequence alignments of empirical data, with reliable reference trees

Simulated Datasets for Phylogeny Estimation

datasets for estimating trees from sequence alignments

Disclaimer

Links to external web sites are for datasets and software available through other laboratories and organizations. The respective labs and organizations are responsible for these datasets and software; please contact them if you have any problems or questions regarding their material. If you experience any problems with our datasets or software, please feel free to contact us at tandy@cs.utexas.edu.
Copyright © 2009-2010 Computational Phylogenetics Lab | ACES 3.304 | University of Texas | Austin, TX 78712
Site help/questions/feedback/requests: e-mail Tandy Warnow