Research Interests
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Design and analysis of algorithms and data structures for combinatorial problems,
especially,
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Algorithms for massive datasets: external-memory,
cache-oblivious, streaming, parallel, etc.
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Algorithms for multicore computing.
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Graph algorithms: static and dynamic, exact and approximate, etc.
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Computational Biology and Bioinformatics
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structure-based drug design, protein-protein docking, protein flexibility, energetics, sequence alignment, etc.
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Experimental algorithmics.
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