mkdir -p classes
mkdir -p classes/gnu/getopt
cp gnu/getopt/*.properties classes/gnu/getopt
javac -g  -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare *.java 
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare P2Runtime/*.java
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare P2Runtime/UnitTests/*.java
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare PicShare/*.java
javah -jni -classpath classes/ NiceSocketImpl
gcc -shared -o libnicesock.so -g -O -I . -I /lusr/java2/include -I /lusr/java2/include/linux -I /usr/include -I /usr/java/j2sdk1.4.2_07/include -I /usr/java/j2sdk1.4.2_07/include/linux NiceSocketImpl.c
NiceSocketImpl.c: In function 'nativeNiceSocketImpl_c_1socket':
NiceSocketImpl.c:92: warning: pointer targets in passing argument 5 of 'getsockopt' differ in signedness
NiceSocketImpl.c: In function 'Java_NiceSocketImpl_c_1connect':
NiceSocketImpl.c:124: warning: incompatible implicit declaration of built-in function 'memcpy'
javah -jni -classpath classes/ NiceSocketInputStream
gcc -shared -o libnicesockis.so -g -O -I . -I /lusr/java2/include -I /lusr/java2/include/linux -I /usr/include -I /usr/java/j2sdk1.4.2_07/include -I /usr/java/j2sdk1.4.2_07/include/linux NiceSocketInputStream.c
javah -jni -classpath classes/ NiceSocketOutputStream
gcc -shared -o libnicesockos.so -g -O -I . -I /lusr/java2/include -I /lusr/java2/include/linux -I /usr/include -I /usr/java/j2sdk1.4.2_07/include -I /usr/java/j2sdk1.4.2_07/include/linux NiceSocketOutputStream.c
javah -jni -classpath classes/ NiceServerSocket
gcc -shared -o libniceservsock.so -g -O -I . -I /lusr/java2/include -I /lusr/java2/include/linux -I /usr/include -I /usr/java/j2sdk1.4.2_07/include -I /usr/java/j2sdk1.4.2_07/include/linux NiceServerSocket.c
NiceServerSocket.c: In function 'Java_NiceServerSocket_c_1makeServerSocket':
NiceServerSocket.c:51: warning: incompatible implicit declaration of built-in function 'bzero'
NiceServerSocket.c:56: warning: incompatible implicit declaration of built-in function 'strcpy'
NiceServerSocket.c:61: warning: incompatible implicit declaration of built-in function 'bcopy'
NiceServerSocket.c: In function 'setSendBufferSize':
NiceServerSocket.c:140: warning: pointer targets in passing argument 5 of 'getsockopt' differ in signedness
/lusr/opt/gcc-4.0.2/bin/g++ -shared -D__NOP2__ -I. -I/usr/include -I/lusr/include -I/lusr/java5/include -I/lusr/java5/include/linux -I/p/graft/boost-1_33_1-gcc4/include/boost-1_33_1 -I/lusr/python/include/python2.4 -I/lusr/openssl/include -o libP2JavaWrapper.so P2Runtime/P2JavaWrapper.C  -L/lusr/python/lib/python2.4/config	    
rmic -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare:. RMIServerImpl
rmic -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare RuntimeRMIServerImpl
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare NFSlib2/*.java 
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare case-studies/Pangaea/*.java
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare case-studies/Bayou/*.java
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare case-studies/ChainReplication/*.java
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare case-studies/TierStore/*.java
javac -g   -source 1.4 -deprecation -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare NFS2Interface/*.java
NFS2Interface/BackupFile.java:35: warning: [deprecation] StreamTokenizer(java.io.InputStream) in java.io.StreamTokenizer has been deprecated
	StreamTokenizer str = new StreamTokenizer(buf);
                              ^
NFS2Interface/Exports.java:45: warning: [deprecation] StreamTokenizer(java.io.InputStream) in java.io.StreamTokenizer has been deprecated
	StreamTokenizer tok = new StreamTokenizer(in);
                              ^
NFS2Interface/Exports.java:155: warning: [deprecation] isSpace(char) in java.lang.Character has been deprecated
	    else if (Character.isSpace(spec.charAt(position)) == false) {
                              ^
3 warnings
# utils/junit/sanityCheck.sh
make classes/utils/junit/TestAll.class
make[1]: Entering directory `/v/filer3/v2q007/nalini/tmp/universalreplication-junit/universalReplication/code'
mkdir -p classes; javac -g   -source 1.4 -d classes -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare utils/junit/TestAll.java
make[1]: Leaving directory `/v/filer3/v2q007/nalini/tmp/universalreplication-junit/universalReplication/code'
java -ea -Djava.rmi.server.codebase="file:///u/nalini/tmp/universalreplication-junit/universalReplication/code/classes/ file:///u/nalini/tmp/universalreplication-junit/universalReplication/code/experiments/expt1/classes/ file:///u/nalini/tmp/universalreplication-junit/universalReplication/code/experiments/expt2/classes/  file:///u/nalini/tmp/universalreplication-junit/universalReplication/code/experiments/expt3/classes/  file:///u/nalini/tmp/universalreplication-junit/universalReplication/code/experiments/sosp/classes" -Djava.security.policy=/u/nalini/tmp/universalreplication-junit/universalReplication/code/java.security.SecurityPermission -Xmx128m -classpath /u/nalini/tmp/universalreplication-junit/universalReplication/code/classes:/u/nalini/tmp/universalreplication-junit/universalReplication/code:./experiments/expt1/classes:./experiments/sosp/classes:./experiments/expt2/classes:./experiments/expt3/classes:./experiments/sosp/PlanetLabExp/classes:sdims.jar:./je-1.7.1/lib/je.jar:FreePastry-1.4.01.jar:./jars/junit.jar:./P2Runtime:./PicShare -Dclass_root=classes -Dtest_type=UNIT junit.textui.TestRunner utils.junit.TestAll
Loaded test case: AcceptStampUnit
Loaded test case: AcceptVVUnit
Loaded test case: CoreUnit
Loaded test case: DebargoMsgUnit
Loaded test case: IncommingConnectionUnit
Loaded test case: InvalListItemUnit
Loaded test case: NiceServerSocketUnit
Loaded test case: NodeIdUnit
Loaded test case: OutgoingBodyConnectionUnit
Loaded test case: PreciseSetUnit
Loaded test case: RandomAccessStateUnit
Loaded test case: RandomAccessStateUnitMT
Loaded test case: StreamIdUnit
Loaded test case: SyncRequestUnit
Loaded test case: UnbindMsgUnit
Loaded test case: WorkQueueUnit
Loaded test case: ClientServerUnit
Loaded test case: DemandReadUnit
Loaded test case: StressTestUnit
Loaded test case: ThreeNodeTestUnit
Loaded test case: PicShareReaderGCUnit
Loaded test case: PicShareReaderUnit
Loaded test case: PicShareWriterUnit
Number of test classes found: 23
.....DBG: MDD -- PersistentLog -- txnNoSync turned off; recovery should work...
DBG: MDD -- PersistentLog -- txnNoSync turned off; recovery should work...
DBG: MDD -- PersistentLog -- txnNoSync turned off; recovery should work...
DBG: MDD -- PersistentLog -- txnNoSync turned off; recovery should work...
DBG: MDD -- PersistentLog -- txnNoSync turned off; recovery should work...
DBG: MDD -- PersistentLog -- txnNoSync turned off; recovery should work...
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/0, 0, 5), (0, "10"), (1173345107859, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/0, 0, 5), (0, "10"), (1173345107859, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/1, 0, 5), (1, "10"), (1173345107865, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/1, 0, 5), (1, "10"), (1173345107865, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/2, 0, 5), (2, "10"), (1173345107868, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/2, 0, 5), (2, "10"), (1173345107868, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/3, 0, 5), (3, "10"), (1173345107870, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/3, 0, 5), (3, "10"), (1173345107870, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/4, 0, 5), (4, "10"), (1173345107873, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/4, 0, 5), (4, "10"), (1173345107873, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/5, 0, 5), (5, "10"), (1173345107875, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/5, 0, 5), (5, "10"), (1173345107875, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/6, 0, 5), (6, "10"), (1173345107879, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/6, 0, 5), (6, "10"), (1173345107879, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/7, 0, 5), (7, "10"), (1173345107885, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/7, 0, 5), (7, "10"), (1173345107885, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/8, 0, 5), (8, "10"), (1173345107888, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/8, 0, 5), (8, "10"), (1173345107888, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/9, 0, 5), (9, "10"), (1173345107895, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/9, 0, 5), (9, "10"), (1173345107895, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/10, 0, 5), (10, "10"), (1173345107897, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/10, 0, 5), (10, "10"), (1173345107897, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/11, 0, 5), (11, "10"), (1173345107901, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/11, 0, 5), (11, "10"), (1173345107901, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/12, 0, 5), (12, "10"), (1173345107903, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/12, 0, 5), (12, "10"), (1173345107903, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/13, 0, 5), (13, "10"), (1173345107908, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/13, 0, 5), (13, "10"), (1173345107908, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/14, 0, 5), (14, "10"), (1173345107912, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/14, 0, 5), (14, "10"), (1173345107912, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/15, 0, 5), (15, "10"), (1173345107914, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/15, 0, 5), (15, "10"), (1173345107914, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/16, 0, 5), (16, "10"), (1173345107917, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/16, 0, 5), (16, "10"), (1173345107917, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/17, 0, 5), (17, "10"), (1173345107919, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/17, 0, 5), (17, "10"), (1173345107919, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/18, 0, 5), (18, "10"), (1173345107922, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/18, 0, 5), (18, "10"), (1173345107922, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/19, 0, 5), (19, "10"), (1173345107944, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/19, 0, 5), (19, "10"), (1173345107944, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/20, 0, 5), (20, "10"), (1173345107947, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/20, 0, 5), (20, "10"), (1173345107947, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/21, 0, 5), (21, "10"), (1173345107949, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/21, 0, 5), (21, "10"), (1173345107949, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.timeout = 9223372036854775807
catchup invaliterator get: BoundInv: <PreciseInv : <(/testRecovery/22, 0, 5), (22, "10"), (1173345107956, "10"), false>1.0, 9223372036854775807, *msg body*>
nep.returnValue=BoundInv: <PreciseInv : <(/testRecovery/22, 0, 5), (22, "10"), (1173345107956, "10"), false>1.0, 9223372036854775807, *msg body*>
Exception in thread "Thread-49" java.lang.AssertionError
	at InvalIterator.advanceCVV(InvalIterator.java:100)
	at InvalIteratorFilter.advanceVV(InvalIteratorFilter.java:108)
	at Core.notifyRecvInval(Core.java:971)
	at IncommingConnection.applyGI(IncommingConnection.java:203)
	at IncommingConnection.run(IncommingConnection.java:653)
Exception in thread "Thread-46" java.lang.AssertionError
	at Core.removeInvalIterator(Core.java:955)
	at OutgoingConnectionWorker.sendCatchupStream(OutgoingConnection.java:659)
	at OutgoingConnectionWorker.addNewRequests(OutgoingConnection.java:744)
	at OutgoingConnectionWorker.run(OutgoingConnection.java:871)
make: *** [junittext] Killed
