The MoBIoS Library: Overview

The Molecular Biological Information System (MoBIoS), a library of biological data types and metric space indexes.

See:
Description

Packages

mobios.app
mobios.dist
mobios.index
mobios.index.algorithms
mobios.mckoi.store
mobios.mckoi.util
mobios.type
mobios.util

The Molecular Biological Information System (MoBIoS), a library of biological data types and metric space indexes.

MoBIoS is a research project of the Department of Computer Sciences, the University of Texas at Austin. The project leader is Dr. Daniel P. Miranker.

The MoBIoS (Molecular Biological Information System) library forms the core of a next generation database management system for life science data. The java-based library utilizes metric space indexing techniques to enable fast retrieval of sequences and mass spectra signatures.

Development continues on our larger project, the MoBIoS DBMS. The MoBIoS DBMS fully integrates our MoBIoS library into McKoi, an open source Java DBMS. It also incorporates a set of SQL extensions embodying the semantics of genomic and proteomic data. Look for the release of this code in late fall or early spring.

Last modified: Wed Aug 16, 2006