• (PPT) Computational and statistical problems in phylogeny reconstruction (Berkeley Statistics, September 5, 2001).
  • (PPT) Interdisciplinary training in computational biology (National Research Council, May 27, 2003).
  • (PPT) The GRAPPA software project for gene order phylogeny. (SMBE 2003)
  • (PPT) NP-hardness and Phylogeny Reconstruction (2003 MAA meeting in Boulder)
  • (PPT) Large-scale optimization in phylogeny reconstruction (Harvard Computer Science, October 2, 2003)
  • (PDF) Three computational problems in phylogeny (Cornell Biology)
  • (PPT) (1) The GRAPPA (Genome Rearrangement Analysis using Parsimony and other Phylogenetic Algorithms) software project, and (2) The Recursive-Iterative-DCM3 technique for speeding up maximum parsimony heuristics in TNT and PAUP*. (Evolution 2003)
  • (PPT) Large-scale phylogeny reconstruction (Harvard OEB, April 16, 2004).
  • (PPT) Tutorial on computational aspects of phylogenetics (CSB 2004, Stanford University).
  • (PPT) Large-scale phylogeny reconstruction (Northeastern University Computer Science, March 7, 2005).
  • (PPT) Reconstruction evolutionary histories of languages (Harvard University, March 21, 2005).
  • (PPT) (PPS) The Disk-Covering Method for Phylogenetic Reconstruction (MIT Computer Science, April 8, 2005).
  • (PDF) Fast Converging Methods for Phylogenetic Reconstruction (Applied Mathematics Colloquium, MIT, April 11, 2005).
  • (PDF) Fast Converging Methods for Phylogenetic Reconstruction (Probability/Statistics Seminar, Heriot-Watt University, Edinburgh, April 18, 2005).
  • (PPT) (PDF) Detecting Language Contact in Indo-European (Linguistics Circle, Edinburgh University, Edinburgh, April 19, 2005).
  • (PPT) CIPRES: Enabling Tree of Life Projects (Glasgow University, Glasgow, April 20, 2005).
  • (PDF) Fast converging phylogenetic methods (Stochastic Processes and Applications, June 27, 2005).
  • (PPT) Large Scale Phylogeny Reconstruction (UCLA, August 1, 2005).
  • (PPT) New Techniques for Large Scale Phylogeny (UCLA, August 1, 2005).
  • (PPT) Compatibility methods for historical linguistics (Symposium on compatibility methods, Fifth Biennial Conference of the Systematics Association, Cardiff, Wales, August 24 2005.
  • (PPT) Disk-covering methods for large-scale phylogeny construction. Mathematical Biosciences Institute (MBI), Phylogeography and Phylogenetics, September 27, 2005.
  • (PPT) CIPRES: Enabling Tree of Life projects. Talk given at the 52nd Annual Systematics Symposium at the Missouri Botanical Gardens, October 9, 2005.
  • (PPT) Algorithms for inferring the Tree of Life, talk given on October 19, 2005, at the Department of Computer Science, UT-Austin.
  • (PPT) Large-Scale Phylogeny, talk given Indiana University, Biology Department, March 2, 2006.
  • (PDF) Fast-Converging Methods, talk given at Indiana University, Department of Mathematics, March 3, 2006.
  • (PPT) Algorithmic Issues in Inferring the "Tree of Life", invited talk, given at WG'06 on June 23, 2006.
  • (PPT) Graph-theoretic and combinatorial problems in phylogenetic tree reconstruction, Mathematics Department, Trinity University, October 5, 2006.
  • (PPT) Algorithmic research in phylogeny reconstruction, CS Department, October 23, 2006.
  • (PPT) Modelling language evolution, Linguistics Department, Rice University, November 30, 2006.
  • (PPT) Graph-theoretic and combinatorial problems in phylogenetic tree reconstruction, Mathematics Department, The University of Texas, March 20, 2007.
  • (PPT), Computational and mathematical challenges involved in very large-scale phylogenetics, Isaac Newton Institute for Mathematical Sciences, Cambridge University, September 3, 2007.
  • (PPT) (PDF) A simulation study comparing phylogeny reconstruction methods for linguistics, The University of Edinburgh, Sept. 14, 2007.
  • (PPT) (PDF) Computational challenges involved in large-scale phylogenetics. Distinguished lecture, Georgia Tech Computational Science and Engineering, Nov. 1, 2007.
  • (PPT) (PDF) Multiple sequence alignment from a phylogenetic perspective, Stanford University, Department of Computer Science, Nov. 13, 2007.
  • (PPT) (PDF) Computational challenges involved in large-scale phylogenetics. Distinguished lecture, University of California at Davis, Department of Computer Sciences, Nov. 15, 2007.
  • (PPT) Introduction to the Warnow lab research, UT-Austin, Nov. 26, 2007.
  • (PPT) (PDF) A simulation study comparing phylogeny reconstruction methods for linguistics, The Newton Institute for Mathematical Sciences, December 4, 2007.
  • (PPT) (PDF) Graph Theoretic and Combinatorial Methods for Phylogeny Reconstruction, The Newton Institute for Mathematical Sciences, December 6, 2007.
  • (PPT) (PDF) A simulation study comparing different methods for phylogeny estimation in linguistics, Paris X (Nanterre), December 12, 2007.
  • (PDF) (PPT) The tree of life: algorithmic and software challenges. Tne Isaac Newton Institute for Mathematical Sciences, Future Directions in Phylogenetic Methods and Models. Dec 17, 2007.
  • (PPT) Large scale phylogenetic reconstruction. Talk given at the UC Davis Computer Science Department, March 13, 2008.
  • (PDF) (PPT) Simultaneous estimation of alignments and trees, talk presented at Huston-Tillotson, March 20 and 21, 2008.
  • (PPT) (PDF) Talk given at Northwestern University, May 2, 2008.
  • (PPT) Talk given to prospective undergraduates at UT-Austin, July 25, 2008.
  • (PDF) (PPT) Talk given at the European Conference on Complex Systems, Jerusalem, Sept. 16, 2007.
  • (PPT) Talk given at the Broad Institute, December 3, 2008.
  • (PPT) Talk given at the Broad Institute, December 5, 2008, for the symposium on the Science of the Human Past.
  • (PDF) (PPT) Keynote address given at the Swadesh Centennary Conference, January 17, 2009.
  • (PDF) (PPT) Talk given at Huston-Tillotson University on Feb 9, 2009.
  • (PDF) Talk given to undergrads at UT-Austin on Feb 23, 2009.
  • (PPT) (PDF) Introduction to phylogenetics. Talk given February 26, 2009.
  • (PDF) (PPT) Talk given at SAMSI, April 3, 2009.
  • (PPT) (PDF) Talk given at WABI, September 13, 2009.
  • (PPT) Talk given at the University of Florida on April 6, 2010, at George Washington University on April 9, 2010, and at the University of Chicago on April 16, 2010.
  • (PDF) (PPT) Talk given at UIC Mathematics Department, April 14, 2010.
  • (PDF) Talk given at the Evolution 2010 meeting about SATe-II, on June 30, 2010.
  • (PPT) (PDF) Talk given at ISMB 2010 on July 13, 2010, on SATe-II.
  • (PDF) Talk given at Stanford on February 2, 2011, on SATe-II and DACTAL.
  • (PDF) (PPT) Talk given at the Sir Isaac Newton Institute of Mathematical Sciences, June 24, 2011, on SATe and DACTAL.
  • (PDF) (PPT) Talk given at the 2011 Heilbronn Annual Conference, 9 September, University of Bristol.
  • (PDF) (PPT) Tutorials on phylogeny estimation given at IPAM, 15 Sept, 2011.
  • (PDF) (PPT) Talk at George Washington University, 19 Sept 2011.
  • (PDF) RECOMB-CG 2011 presentation.
  • (PDF) (PPT) Visions of Computer Science, Oct 26, 2011.
  • (PDF) (PPT) UCLA Computer Science, Nov 3, 2011.
  • (PDF) (PPT) IPAM talk, Dec 14, 2011.
  • (PDF) (PPT) SEPP-TIPP talk, Sandia National Labs Livermore, Feb 16, 2012, and Joint Genome Institute, Feb 17, 2012
  • (PDF) Talk to undergrads at UTCS on Feb 23, 2012
  • Two talks at UPenn in March, 2012: March 12 talk (PPT), March 13 talk (PPT)
  • USC, March 31, 2012: (USC-March31.PDF)
  • UCLA, April 17, 2012 (PDF)
  • MIT, May 16, 2012 (PDF)
  • National Museum of Natural History, May 20, 2012 (PDF) (PPT)
  • National Museum of Natural History, May 22, 2012 (PDF) (PPT)
  • J Craig Venter Institute, May 29, 2012 (PDF)
  • PSB 2013 (PPT) (PDF)
  • Big Data for Biology, IPAM 2013 (PDF)
  • MAGE conference (David Sankoff celebration), 24 August, 2013 (PPT) (PDF)
  • UT-Austin, 4 September 2013 (PDF) (PPT)
  • UT-Austin, 16 September 2013, Mathematics Colloquium (PPTX) (PDF)
  • University of Maryland, 26 September Computer Science (PPT) (PDF)
  • University of Maryland, 27 September, Mathematics (PPTX) (PDF)
  • University of Texas, 16 October, CNS (PPTX) (PDF)
  • University of California at Berkeley, MCZ, October 17, 2013 (PPTX) (PDF)
  • University of California at Berkeley, Simons Institute, October 18, 2013 (PPT) (PDF)
  • University of Illinois, Nov 8, 2013 (PPT) (PDF)
  • University of Texas, Jan 25, 2014 (PDF) (PPTX)
  • Janelia Farm, Feb 10, 2014 (PDF)
  • UIUC School of Integrative Biology, Feb 17, 2014 (PDF)
  • UIUC School of Integrative Biology, Feb 18, 2014 (PDF)
  • Pattie Epps' class (PPT) (PDF)
  • Cambridge University, March 24, 2014 (PDF)
  • Copenhagen University, March 31, 2014 (PPTX) (PDF)
  • Simons Institute, April 28, 2014 (PDF)
  • Summer School, May 19, 2014 (PDF) (PPTX)
  • IPAM, June 10, 2014 (PDF) (PPTX)
  • UIUC PEEC Seminar, September 10, 2014 (PDF) (PPTX)
  • Case Western, September 16, 2014 (PPTX)
  • UIUC CompGen seminar, September 19, 2014 (PPTX) (PDF)
  • PNNL colloquium, September 26, 2014
  • UIUC DAIS seminar, November 4, 2014 (PPTX) (PDF)
  • UIUC CS undergrad course, October 1, 2014 (PPTX) (PDF)
  • UIUC Math colloquium, October 2, 2014
  • RECOMB-CG, October 21, 2014 (PPTX) (PDF)
  • UPENN Computational Biology, October 23, 2014 (PPTX) (PDF)
  • Columbia University, October 24, 2014 (PPTX) (PDF)
  • Institute for Genomic Biology, November 18, 2014 (PPTX) (PDF)
  • Statistics Department, UIUC, November 21, 2014 (PPTX) (PDF)
  • Swarthmore College, December 3, 2014 (PPTX) (PDF)
  • University of Illinois, Theory Seminar, December 8, 2014 (PPTX) (PDF)
  • IPAM, January 12, 2015 (PPTX)
  • NCSA, Feb 13, 2015 (PPTX) (PDF)